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The map label for this gene is ssb [H]

Identifier: 126208261

GI number: 126208261

Start: 902468

End: 902992

Strand: Direct

Name: ssb [H]

Synonym: APL_0783

Alternate gene names: 126208261

Gene position: 902468-902992 (Clockwise)

Preceding gene: 126208248

Following gene: 126208267

Centisome position: 39.68

GC content: 47.62

Gene sequence:

>525_bases
ATGGCAGGTATTAATAAAGTTATCATCGTGGGCAATTTAGGTAACGATCCTGAAATGCGCACCATGCCAAACGGCGAAGC
GGTTGCAAATATTAGCGTAGCAACCAGTGAAAGTTGGACGGATAAAAATACGGGCGAACGCCGTGAAGTAACCGAATGGC
ACCGTATCGTATTCTACCGTCGCCAAGCGGAAGTTGCCGGTCAATACTTACGTAAAGGCTCACAAGTTTATGTTGAAGGC
CGTTTAAAAACACGTAAATGGCAAGACCAAAACGGTCAAGATCGTTACACTACCGAAATCCAAGGTGACGTTTTACAAAT
GTTAGGCGGACGTAACCAAGGCGGCGATTTCGGCGGTAACCAAGGCGGTTGGGGAAATTCAGCACCTGCACCACAACAAA
GTTACAACCAAGGTAACAGCGGTTACGGCTATGACCAAACAGCAAGTCGCTCTGCTCCACAAGCAGCGAAACCTGCTCAA
GCAGAACCACCAATGGATAACTTCGACGACGATATCCCGTTCTAA

Upstream 100 bases:

>100_bases
TAACTGTACAAAATATCAGTTTTAATGCGTGCATTTTTTTGAATTTCAGGTAGAATATCGCACAAAATTTACAGCACTTA
ATTAATTCACAGAGGATTTT

Downstream 100 bases:

>100_bases
ACACAAGCGGTTAATTTTTATCGAATATTTACAAATAAAAAACGGAAGCCTTACTTCCGTTTTTTATTTAGGTTAAAGAA
TTTAGCGTGCAAGACTTGCA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAEVAGQYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLGGRNQGGDFGGNQGGWGNSAPAPQQSYNQGNSGYGYDQTASRSAPQAAKPAQ
AEPPMDNFDDDIPF

Sequences:

>Translated_174_residues
MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAEVAGQYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLGGRNQGGDFGGNQGGWGNSAPAPQQSYNQGNSGYGYDQTASRSAPQAAKPAQ
AEPPMDNFDDDIPF
>Mature_173_residues
AGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAEVAGQYLRKGSQVYVEGR
LKTRKWQDQNGQDRYTTEIQGDVLQMLGGRNQGGDFGGNQGGWGNSAPAPQQSYNQGNSGYGYDQTASRSAPQAAKPAQA
EPPMDNFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=32.7433628318584, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1790494, Length=187, Percent_Identity=54.0106951871658, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19188; Mature: 19057

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYR
CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEVAGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVLQMLGGRNQGGDFGGN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
QGGWGNSAPAPQQSYNQGNSGYGYDQTASRSAPQAAKPAQAEPPMDNFDDDIPF
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYR
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEVAGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVLQMLGGRNQGGDFGGN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
QGGWGNSAPAPQQSYNQGNSGYGYDQTASRSAPQAAKPAQAEPPMDNFDDDIPF
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA