| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208262
Identifier: 126208262
GI number: 126208262
Start: 903161
End: 903979
Strand: Reverse
Name: 126208262
Synonym: APL_0784
Alternate gene names: NA
Gene position: 903979-903161 (Counterclockwise)
Preceding gene: 126208263
Following gene: 126208260
Centisome position: 39.74
GC content: 33.21
Gene sequence:
>819_bases ATGGTTACCCATACCGTTATTATTAGTGATAGAGCAAAAGACAATATCACGGTTTATACAAAAGAGCCTGTGTTCTTAGC GATTGCAGATCGTGAAGACTTAAAAGCGTTAAAACATTTAGAAGAAGCAAATAGAGCAGGAATTTATATCTTATTAGGCG AGAATCAGCGTTATGTTGGGCAAGCCAGTGGGAAAATTTATGATCGCCTAATCACTCATAATGATAATAAAGATTGGTGG AGTAAGATTATTTTCTTTGGGCGTGAAGATGGGCATTTAGATAAATCACAAACTGATTATCTTGAGAAGAAATTAATTGA GTCTTTTCAGAAAACCGATTTAACATTAGATAATGTTACTTCGGGTAATACGTCTTTTATTGAAAAAACAAGTAAGATCA AGGCAGATAATGTTTGGAATATTGCTCAAGAAATCTTAGATGAGGTCGCGCATATTAATATATTTGAAAGCTATGTGGCT GAGGAGGAAGAAAACCAAACTGGTCAGATTTATATTGCACTGGATAAACATAAAATTTCAGGCAAAAGTTACCGAGACAA TCAGAAAAATTTCTTTGTATTTTTATTGAAACAGCCTAAATATCGTTCTTTAGTGGAAGATTTTTGTTTAAATGGAAAGC CAACAGCTTCCTATTGTATTGGAAGCGAACCAAGTCTTAGACCAAATGGAATGAAATATACTATTCAGCTTGAAGAAGGT CTTTATCTGTATATAAATTTATCAGTAAAAGGACTACGTAAAGCCATTCAAAATTTTGCAGATGCAACAGGTATGAAAGT GATGTTTCATTGGGATTAA
Upstream 100 bases:
>100_bases TAAGCCGTTAAACACGAAATTTTTCGCCTATGTGAGTTTTTTCTCGGAATAGTTAGGCTAATATAAGAGCTATAAACTTT ATAGAATAAAAGGAAGATTT
Downstream 100 bases:
>100_bases AAAATATCGTCTAAAAGTGATATGCAAGTGCTATTTATATGACAAGCGGTCAATTTCTATAAAAATTTTGCAAGTCTTGC ACGCTAAATTCTTTAACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MVTHTVIISDRAKDNITVYTKEPVFLAIADREDLKALKHLEEANRAGIYILLGENQRYVGQASGKIYDRLITHNDNKDWW SKIIFFGREDGHLDKSQTDYLEKKLIESFQKTDLTLDNVTSGNTSFIEKTSKIKADNVWNIAQEILDEVAHINIFESYVA EEEENQTGQIYIALDKHKISGKSYRDNQKNFFVFLLKQPKYRSLVEDFCLNGKPTASYCIGSEPSLRPNGMKYTIQLEEG LYLYINLSVKGLRKAIQNFADATGMKVMFHWD
Sequences:
>Translated_272_residues MVTHTVIISDRAKDNITVYTKEPVFLAIADREDLKALKHLEEANRAGIYILLGENQRYVGQASGKIYDRLITHNDNKDWW SKIIFFGREDGHLDKSQTDYLEKKLIESFQKTDLTLDNVTSGNTSFIEKTSKIKADNVWNIAQEILDEVAHINIFESYVA EEEENQTGQIYIALDKHKISGKSYRDNQKNFFVFLLKQPKYRSLVEDFCLNGKPTASYCIGSEPSLRPNGMKYTIQLEEG LYLYINLSVKGLRKAIQNFADATGMKVMFHWD >Mature_272_residues MVTHTVIISDRAKDNITVYTKEPVFLAIADREDLKALKHLEEANRAGIYILLGENQRYVGQASGKIYDRLITHNDNKDWW SKIIFFGREDGHLDKSQTDYLEKKLIESFQKTDLTLDNVTSGNTSFIEKTSKIKADNVWNIAQEILDEVAHINIFESYVA EEEENQTGQIYIALDKHKISGKSYRDNQKNFFVFLLKQPKYRSLVEDFCLNGKPTASYCIGSEPSLRPNGMKYTIQLEEG LYLYINLSVKGLRKAIQNFADATGMKVMFHWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31335; Mature: 31335
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTHTVIISDRAKDNITVYTKEPVFLAIADREDLKALKHLEEANRAGIYILLGENQRYVG CCEEEEEEECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEE QASGKIYDRLITHNDNKDWWSKIIFFGREDGHLDKSQTDYLEKKLIESFQKTDLTLDNVT CCCCHHHHHHEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC SGNTSFIEKTSKIKADNVWNIAQEILDEVAHINIFESYVAEEEENQTGQIYIALDKHKIS CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECC GKSYRDNQKNFFVFLLKQPKYRSLVEDFCLNGKPTASYCIGSEPSLRPNGMKYTIQLEEG CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEECC LYLYINLSVKGLRKAIQNFADATGMKVMFHWD EEEEEEECHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MVTHTVIISDRAKDNITVYTKEPVFLAIADREDLKALKHLEEANRAGIYILLGENQRYVG CCEEEEEEECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCEEE QASGKIYDRLITHNDNKDWWSKIIFFGREDGHLDKSQTDYLEKKLIESFQKTDLTLDNVT CCCCHHHHHHEECCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC SGNTSFIEKTSKIKADNVWNIAQEILDEVAHINIFESYVAEEEENQTGQIYIALDKHKIS CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECC GKSYRDNQKNFFVFLLKQPKYRSLVEDFCLNGKPTASYCIGSEPSLRPNGMKYTIQLEEG CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEECC LYLYINLSVKGLRKAIQNFADATGMKVMFHWD EEEEEEECHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA