| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208263
Identifier: 126208263
GI number: 126208263
Start: 904303
End: 906294
Strand: Reverse
Name: 126208263
Synonym: APL_0785
Alternate gene names: NA
Gene position: 906294-904303 (Counterclockwise)
Preceding gene: 126208264
Following gene: 126208262
Centisome position: 39.85
GC content: 27.01
Gene sequence:
>1992_bases ATGAAAACAGTTATTCATGAAATAGGTGTCGTAGACAAATGTGGAAAAATACACAAAGTTGAGTTAAAAGAAGGCTTAAA TATTATTACAGGAAAATCATCTACAGGGAAAAGTGCTTTAATAGAAATTTTTGATTATTGCTTTGGAAGTCAATTTAATG TACCTAAAGGAGTTATTACAGAAAATTCGGAAATTTATTACTTATATATTCAAATTAAAGAATCTTATTTTGTTATTGGT CGAAAAAAAGATAATGGTATAGGCTTTTTTAGACAAGAAGAAATATATAGTTCAGATCTGATTTCATCTGGCTACTTTAA AGAAGATTATTTTTTAGCAAAAGATAATTATAGGAAGCAGTTAAGAAAACTGTTTATTGATATTATTGATGTTGATGAAT CTCTTATTGCTAAAGAATTAAAAGGTAAAGCAACTCCGACCCCATCGGTTCGGAGTTTTATGTCATTCATTTTGCAACAT CAAAATCTCATAGCTAATAAGCATGCTTTATTTTATCGATTTGATGAAAAAGAGAAGAGAGAACAAGTTATTGAGCATAC TAAAATATTTTTAGGCTTTGTTGATCAAACATATTTTCTACTTTTCCAACAAAAAGAAAAATTAGAATCTGAGATTAAAA AATTACAGAGAGAACAGAAAGTTATTGATAAATATATCAATGAAAATATTTCTAGTATAGAAAATCAATTAAATCTCCTT TATGCATTAATGGGTGTAGAAGAAACTCCTATTAAAATAGAAGATATTAAAACTAATCCTCATGATTCAAGGTTAAAATT AGATAAATTTGTTACAGATGATAAGATTATTTATGCTTCAGATAAAGAGCTTGAATATTTTAAGAATTTATTACTAGAGT TAAGAGCTAATGATGATAAAAGAAAGAATTTATCTTTTAAGCTAGCATCTATTGAAAGAAGCTTACAAGTTGAAAAAGAA GTGTCAGCAACATTATCTTCATTAAATGATTTCAGACAGGCTCAAGTTGGGATTTCTGTTTGCCCCTTCTGTTTATCTGA AAAAGATTCTTTACCAAAACAAGCTGAAAACTTAAAGCAAGCTATGCAAAAATTATCAAGAGATCTTACTTTAAATCATT CATTAAAATCTCACTTGGAAGTTGAACAAGAAAAAATCCGACAGGAAATTAAAAAACTTAATATTAAAATCCGAGAAATT CAAAAAATCAAAAAGCAATTAGAACAAAATAATAATATTAAAACAGAAAAAAGTCGTTATGAGCAGATATTAATGATTAA AGCTAGTTTATTTTCTATGCTTGATATTCTTGCTAAAAAGCAATCTGGGAAACTAGAGGAAAATAATATTGATGAACTTC AATCCATTTTGAATGGAATAAATACTAAATTGATAAATTATGATAATAATAAAAAGCTAAAAGATGCAGAGACTAGGATA AAAGAGATTATGTCAGATCTTGGAAAGAATTTTGAGTTTGAAGATTCTTATCACCCTATCAATTTAAACTTTTCTTTAAA TAGTTTCGATTTGTATCATATTAATGAATCTAATGACAGGATTTATTTACGTTCTATGGGGAGCGGAGCAAACTGGTTAT ATTCTCATTTAACTCTATTTTTAGCCTTACATCAATATTTTATTGAATTGGAAAGTCGAAATTATAAATGTTGTATTCCA TCAATATTATTTTTAGATCAGCCAACGCAAGTTTATTTTCCTAATTTTCAACATGATAAAGCTTTAGAGTTTGAAGAACG TAAGATTGCAAATTTAGAGCATAAAGAGAATATTGATGGTGATATCCAATCGGTTACAAATCTTTTTACAAGATTGGCCG AATATTGTAATAATTTGAAAAATAAGTATGGATATTCTCCTCAAATTATTGTTACGGATCATGCTGATAATTTGAATTTG AATGGCTTTGAATTTGAATCTTTTGTGAAGAATAGATGGAGAACAAGAGGGTTTATCGAATTAAATGATTAA
Upstream 100 bases:
>100_bases CAGCCCAAGATATTGAAAATATTAAAATTGCGAGAAATTATGCAAAGTTATTTAGCAATCATTCTGTGTATGAAATATAC ACACTATTAGGAGTTAAACC
Downstream 100 bases:
>100_bases ATTGCTTTAATAATTATAAAGATTGGATGTTTGTCTGAAATCTTTATTTATAGCTAATGTTTAGCTCTAATAAACGCCGT CTGAAACTTCCAGACGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MKTVIHEIGVVDKCGKIHKVELKEGLNIITGKSSTGKSALIEIFDYCFGSQFNVPKGVITENSEIYYLYIQIKESYFVIG RKKDNGIGFFRQEEIYSSDLISSGYFKEDYFLAKDNYRKQLRKLFIDIIDVDESLIAKELKGKATPTPSVRSFMSFILQH QNLIANKHALFYRFDEKEKREQVIEHTKIFLGFVDQTYFLLFQQKEKLESEIKKLQREQKVIDKYINENISSIENQLNLL YALMGVEETPIKIEDIKTNPHDSRLKLDKFVTDDKIIYASDKELEYFKNLLLELRANDDKRKNLSFKLASIERSLQVEKE VSATLSSLNDFRQAQVGISVCPFCLSEKDSLPKQAENLKQAMQKLSRDLTLNHSLKSHLEVEQEKIRQEIKKLNIKIREI QKIKKQLEQNNNIKTEKSRYEQILMIKASLFSMLDILAKKQSGKLEENNIDELQSILNGINTKLINYDNNKKLKDAETRI KEIMSDLGKNFEFEDSYHPINLNFSLNSFDLYHINESNDRIYLRSMGSGANWLYSHLTLFLALHQYFIELESRNYKCCIP SILFLDQPTQVYFPNFQHDKALEFEERKIANLEHKENIDGDIQSVTNLFTRLAEYCNNLKNKYGYSPQIIVTDHADNLNL NGFEFESFVKNRWRTRGFIELND
Sequences:
>Translated_663_residues MKTVIHEIGVVDKCGKIHKVELKEGLNIITGKSSTGKSALIEIFDYCFGSQFNVPKGVITENSEIYYLYIQIKESYFVIG RKKDNGIGFFRQEEIYSSDLISSGYFKEDYFLAKDNYRKQLRKLFIDIIDVDESLIAKELKGKATPTPSVRSFMSFILQH QNLIANKHALFYRFDEKEKREQVIEHTKIFLGFVDQTYFLLFQQKEKLESEIKKLQREQKVIDKYINENISSIENQLNLL YALMGVEETPIKIEDIKTNPHDSRLKLDKFVTDDKIIYASDKELEYFKNLLLELRANDDKRKNLSFKLASIERSLQVEKE VSATLSSLNDFRQAQVGISVCPFCLSEKDSLPKQAENLKQAMQKLSRDLTLNHSLKSHLEVEQEKIRQEIKKLNIKIREI QKIKKQLEQNNNIKTEKSRYEQILMIKASLFSMLDILAKKQSGKLEENNIDELQSILNGINTKLINYDNNKKLKDAETRI KEIMSDLGKNFEFEDSYHPINLNFSLNSFDLYHINESNDRIYLRSMGSGANWLYSHLTLFLALHQYFIELESRNYKCCIP SILFLDQPTQVYFPNFQHDKALEFEERKIANLEHKENIDGDIQSVTNLFTRLAEYCNNLKNKYGYSPQIIVTDHADNLNL NGFEFESFVKNRWRTRGFIELND >Mature_663_residues MKTVIHEIGVVDKCGKIHKVELKEGLNIITGKSSTGKSALIEIFDYCFGSQFNVPKGVITENSEIYYLYIQIKESYFVIG RKKDNGIGFFRQEEIYSSDLISSGYFKEDYFLAKDNYRKQLRKLFIDIIDVDESLIAKELKGKATPTPSVRSFMSFILQH QNLIANKHALFYRFDEKEKREQVIEHTKIFLGFVDQTYFLLFQQKEKLESEIKKLQREQKVIDKYINENISSIENQLNLL YALMGVEETPIKIEDIKTNPHDSRLKLDKFVTDDKIIYASDKELEYFKNLLLELRANDDKRKNLSFKLASIERSLQVEKE VSATLSSLNDFRQAQVGISVCPFCLSEKDSLPKQAENLKQAMQKLSRDLTLNHSLKSHLEVEQEKIRQEIKKLNIKIREI QKIKKQLEQNNNIKTEKSRYEQILMIKASLFSMLDILAKKQSGKLEENNIDELQSILNGINTKLINYDNNKKLKDAETRI KEIMSDLGKNFEFEDSYHPINLNFSLNSFDLYHINESNDRIYLRSMGSGANWLYSHLTLFLALHQYFIELESRNYKCCIP SILFLDQPTQVYFPNFQHDKALEFEERKIANLEHKENIDGDIQSVTNLFTRLAEYCNNLKNKYGYSPQIIVTDHADNLNL NGFEFESFVKNRWRTRGFIELND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77635; Mature: 77635
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVIHEIGVVDKCGKIHKVELKEGLNIITGKSSTGKSALIEIFDYCFGSQFNVPKGVIT CCCHHHHCCCHHCCCCEEEEEHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEE ENSEIYYLYIQIKESYFVIGRKKDNGIGFFRQEEIYSSDLISSGYFKEDYFLAKDNYRKQ CCCEEEEEEEEEECCEEEEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCEEEECHHHHHH LRKLFIDIIDVDESLIAKELKGKATPTPSVRSFMSFILQHQNLIANKHALFYRFDEKEKR HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH EQVIEHTKIFLGFVDQTYFLLFQQKEKLESEIKKLQREQKVIDKYINENISSIENQLNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YALMGVEETPIKIEDIKTNPHDSRLKLDKFVTDDKIIYASDKELEYFKNLLLELRANDDK HHHHCCCCCCEEEEECCCCCCCCCEEHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCC RKNLSFKLASIERSLQVEKEVSATLSSLNDFRQAQVGISVCPFCLSEKDSLPKQAENLKQ CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCHHHHHHHHH AMQKLSRDLTLNHSLKSHLEVEQEKIRQEIKKLNIKIREIQKIKKQLEQNNNIKTEKSRY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH EQILMIKASLFSMLDILAKKQSGKLEENNIDELQSILNGINTKLINYDNNKKLKDAETRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH KEIMSDLGKNFEFEDSYHPINLNFSLNSFDLYHINESNDRIYLRSMGSGANWLYSHLTLF HHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHH LALHQYFIELESRNYKCCIPSILFLDQPTQVYFPNFQHDKALEFEERKIANLEHKENIDG HHHHHHHHHHCCCCCEEECCEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCHHCCCCC DIQSVTNLFTRLAEYCNNLKNKYGYSPQIIVTDHADNLNLNGFEFESFVKNRWRTRGFIE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCEE LND ECC >Mature Secondary Structure MKTVIHEIGVVDKCGKIHKVELKEGLNIITGKSSTGKSALIEIFDYCFGSQFNVPKGVIT CCCHHHHCCCHHCCCCEEEEEHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEE ENSEIYYLYIQIKESYFVIGRKKDNGIGFFRQEEIYSSDLISSGYFKEDYFLAKDNYRKQ CCCEEEEEEEEEECCEEEEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCEEEECHHHHHH LRKLFIDIIDVDESLIAKELKGKATPTPSVRSFMSFILQHQNLIANKHALFYRFDEKEKR HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH EQVIEHTKIFLGFVDQTYFLLFQQKEKLESEIKKLQREQKVIDKYINENISSIENQLNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YALMGVEETPIKIEDIKTNPHDSRLKLDKFVTDDKIIYASDKELEYFKNLLLELRANDDK HHHHCCCCCCEEEEECCCCCCCCCEEHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCC RKNLSFKLASIERSLQVEKEVSATLSSLNDFRQAQVGISVCPFCLSEKDSLPKQAENLKQ CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCHHHHHHHHH AMQKLSRDLTLNHSLKSHLEVEQEKIRQEIKKLNIKIREIQKIKKQLEQNNNIKTEKSRY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH EQILMIKASLFSMLDILAKKQSGKLEENNIDELQSILNGINTKLINYDNNKKLKDAETRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH KEIMSDLGKNFEFEDSYHPINLNFSLNSFDLYHINESNDRIYLRSMGSGANWLYSHLTLF HHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHH LALHQYFIELESRNYKCCIPSILFLDQPTQVYFPNFQHDKALEFEERKIANLEHKENIDG HHHHHHHHHHCCCCCEEECCEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCHHCCCCC DIQSVTNLFTRLAEYCNNLKNKYGYSPQIIVTDHADNLNLNGFEFESFVKNRWRTRGFIE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCCCCEE LND ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA