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The map label for this gene is 126208146

Identifier: 126208146

GI number: 126208146

Start: 760505

End: 760765

Strand: Reverse

Name: 126208146

Synonym: APL_0666

Alternate gene names: NA

Gene position: 760765-760505 (Counterclockwise)

Preceding gene: 126208147

Following gene: 126208145

Centisome position: 33.45

GC content: 40.23

Gene sequence:

>261_bases
ATGGAAAAGGTCGCACGTTTATTTAGAAACGGACGTAATCAAGCCGTACGATTACCGGTTGAATTTGAGTTTAATGCGAA
GCAAGTTTATGTGTTTAAAGAAGCAAACGGCGATATTACGCTTTCGACACGTTCTCGCAATCAGCAAAATTGGCAGAAAG
TCTTTGAGTTATTACCAATGCTTGAATGTGATGAACAGTTTTTATCGGAACAAGAACGCAAGCAAGAAATGGCAACTCGA
GATCCGTTCGAGGGCTTTTAA

Upstream 100 bases:

>100_bases
AATTGTAAAAAATCAAGCGAATTTGACCGCTTGCTTTGACATTGGTATCGTATAAGCATATATTAAAGCATATGCTTAAT
CTCATCAAAGGAGCAATAAA

Downstream 100 bases:

>100_bases
ATGTATATGCTAGATACTAATACGGTGAGTTATTTCTTTAGGCAAGATCCTACTGTGGTTAAGAAACTACAACAACTTAA
TCCGGAATTGATTTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence Protein VagC; SpoVT/AbrB Domain-Containing Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEKVARLFRNGRNQAVRLPVEFEFNAKQVYVFKEANGDITLSTRSRNQQNWQKVFELLPMLECDEQFLSEQERKQEMATR
DPFEGF

Sequences:

>Translated_86_residues
MEKVARLFRNGRNQAVRLPVEFEFNAKQVYVFKEANGDITLSTRSRNQQNWQKVFELLPMLECDEQFLSEQERKQEMATR
DPFEGF
>Mature_86_residues
MEKVARLFRNGRNQAVRLPVEFEFNAKQVYVFKEANGDITLSTRSRNQQNWQKVFELLPMLECDEQFLSEQERKQEMATR
DPFEGF

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10290; Mature: 10290

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVARLFRNGRNQAVRLPVEFEFNAKQVYVFKEANGDITLSTRSRNQQNWQKVFELLPM
CHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCC
LECDEQFLSEQERKQEMATRDPFEGF
CCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEKVARLFRNGRNQAVRLPVEFEFNAKQVYVFKEANGDITLSTRSRNQQNWQKVFELLPM
CHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCC
LECDEQFLSEQERKQEMATRDPFEGF
CCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA