| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is thiE [H]
Identifier: 126208022
GI number: 126208022
Start: 610464
End: 610877
Strand: Direct
Name: thiE [H]
Synonym: APL_0540
Alternate gene names: 126208022
Gene position: 610464-610877 (Clockwise)
Preceding gene: 126208021
Following gene: 126208023
Centisome position: 26.84
GC content: 44.2
Gene sequence:
>414_bases GTGGACGATAACGTGGCATTAGCGATTGAGATTGATGCGGACGGCGTACATGTCGGACAAAAAGATATGTCACCGATAAT GATTCGTCAGATGACCGATAAACCTTTGATTATCGGCTTATCGAATAATACCTTAGAAGATCTTTGGCGTTCAGAACAGA TGATCGAGGTGGATTATTGCGGATTAGGTCCGGTCTTCCCGACCAATTCCAAAGAAAAACATAATCCGCCGATTGGTTTG GATTTTGTTAAAAAAGCCCGTGAAGCTGGGATTCGTAAGCCGATTGTTTCTATCGGCGGAGTGAAAGCCGAACACGTGGC AACCTTGAAACAAAACGGAGTGGACGGCATCGCGGTTATCACTGCGATTAGTTTAGCTTCTGATGTTTCTCAAGCCGTCA AACGATTATTATAA
Upstream 100 bases:
>100_bases ACGGTAGTGATTAAGGGCGGGCATTTGGCGGATTCGCAAAGTGCGCATTGCCGTGATTGGGTATTTACACCAATGCCGTC TATATAACGTTCCGTTTATT
Downstream 100 bases:
>100_bases TTTTGCTCTTATACAAGCGGTCTTTTTTCAAGATTTTTTGCAAAATTTCTTGGAAAAACGACCGCTTGCTTTTTTGTGCT TTTCCTTTCCAAAATAGCGG
Product: thiamine monophosphate synthase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MDDNVALAIEIDADGVHVGQKDMSPIMIRQMTDKPLIIGLSNNTLEDLWRSEQMIEVDYCGLGPVFPTNSKEKHNPPIGL DFVKKAREAGIRKPIVSIGGVKAEHVATLKQNGVDGIAVITAISLASDVSQAVKRLL
Sequences:
>Translated_137_residues MDDNVALAIEIDADGVHVGQKDMSPIMIRQMTDKPLIIGLSNNTLEDLWRSEQMIEVDYCGLGPVFPTNSKEKHNPPIGL DFVKKAREAGIRKPIVSIGGVKAEHVATLKQNGVDGIAVITAISLASDVSQAVKRLL >Mature_137_residues MDDNVALAIEIDADGVHVGQKDMSPIMIRQMTDKPLIIGLSNNTLEDLWRSEQMIEVDYCGLGPVFPTNSKEKHNPPIGL DFVKKAREAGIRKPIVSIGGVKAEHVATLKQNGVDGIAVITAISLASDVSQAVKRLL
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=145, Percent_Identity=32.4137931034483, Blast_Score=64, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325042, Length=159, Percent_Identity=34.5911949685535, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 14799; Mature: 14799
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNVALAIEIDADGVHVGQKDMSPIMIRQMTDKPLIIGLSNNTLEDLWRSEQMIEVDYC CCCCEEEEEEECCCCEEECCCCCCHHEEEECCCCCEEEEECCCCHHHHHCCCCEEEEECC GLGPVFPTNSKEKHNPPIGLDFVKKAREAGIRKPIVSIGGVKAEHVATLKQNGVDGIAVI CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHH TAISLASDVSQAVKRLL HHHHHHHHHHHHHHHHC >Mature Secondary Structure MDDNVALAIEIDADGVHVGQKDMSPIMIRQMTDKPLIIGLSNNTLEDLWRSEQMIEVDYC CCCCEEEEEEECCCCEEECCCCCCHHEEEECCCCCEEEEECCCCHHHHHCCCCEEEEECC GLGPVFPTNSKEKHNPPIGLDFVKKAREAGIRKPIVSIGGVKAEHVATLKQNGVDGIAVI CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHH TAISLASDVSQAVKRLL HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA