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The map label for this gene is 126208019

Identifier: 126208019

GI number: 126208019

Start: 608236

End: 608859

Strand: Direct

Name: 126208019

Synonym: APL_0537

Alternate gene names: NA

Gene position: 608236-608859 (Clockwise)

Preceding gene: 126208018

Following gene: 126208020

Centisome position: 26.74

GC content: 44.55

Gene sequence:

>624_bases
ATGCAGAGCACTTACTGGCGTACATATACCGAACATCTTTTTGTGCAAAAAATGGCGGACGGTAGCTTGCCGAAAAGTAG
CTTTCAGCATTATTTGAAACAAGATTATCTGTATCTTTATCAATATTGCCGAGCATTATCGCTCGGTGTTTATAAAGCGG
AAAATTTTGACCAAATGCGTTACGCATTGGATGCGACACAAGCCATCTTGAACGAAGTGGAACTGCACTTGCAGTTTTGC
CGTGAATGGGGGATTGAGGAACAAGAGGTGCGTAAAACGCCGGAAAGCTCGGCGTGTGTCGCTTATACGCGTTATGTACT
CGATTGCGGTATGCGAGGCGGATTAGCCGATCTATTTATGGCGATAGCACCTTGTGCAATCGGTTATGCGGAAATCGGTA
AGAAATTAGCGCAGACTGCGGTGGAAAATACGCCGTATCAAGCGTGGATTGATACCTATGCGGCTCCCGAATATCAAGCG
GCAGTAGCAAAACTGGCGGATTTCCTTAATCAGCTTTGTGAAAACTTATCGCTAGAACAGCTCACAAAACTCCAAGAAAT
CTTTACTACTGCTACACGTATGGAAGTCGCATTTTGGCAAATGGGGCTTGATAAAACAATGTAA

Upstream 100 bases:

>100_bases
GGTTTGGAAAGATTGGGAACCGTATTTAGGTAGAACGTTATCTTAAATGATATGGTTAAAAAAGGAGAAAAAATGACCGC
TATTCAGCAATTTATCCAAA

Downstream 100 bases:

>100_bases
TCTTTCTTAAAAGGAGCAAATGATGAAATATGTAAAAAAATTAGCTTTTCTGACCGCTTGTAGTTTAGCGGTACAAGCTC
ACGCCGGCGAGAAAATGACC

Product: putative transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MQSTYWRTYTEHLFVQKMADGSLPKSSFQHYLKQDYLYLYQYCRALSLGVYKAENFDQMRYALDATQAILNEVELHLQFC
REWGIEEQEVRKTPESSACVAYTRYVLDCGMRGGLADLFMAIAPCAIGYAEIGKKLAQTAVENTPYQAWIDTYAAPEYQA
AVAKLADFLNQLCENLSLEQLTKLQEIFTTATRMEVAFWQMGLDKTM

Sequences:

>Translated_207_residues
MQSTYWRTYTEHLFVQKMADGSLPKSSFQHYLKQDYLYLYQYCRALSLGVYKAENFDQMRYALDATQAILNEVELHLQFC
REWGIEEQEVRKTPESSACVAYTRYVLDCGMRGGLADLFMAIAPCAIGYAEIGKKLAQTAVENTPYQAWIDTYAAPEYQA
AVAKLADFLNQLCENLSLEQLTKLQEIFTTATRMEVAFWQMGLDKTM
>Mature_207_residues
MQSTYWRTYTEHLFVQKMADGSLPKSSFQHYLKQDYLYLYQYCRALSLGVYKAENFDQMRYALDATQAILNEVELHLQFC
REWGIEEQEVRKTPESSACVAYTRYVLDCGMRGGLADLFMAIAPCAIGYAEIGKKLAQTAVENTPYQAWIDTYAAPEYQA
AVAKLADFLNQLCENLSLEQLTKLQEIFTTATRMEVAFWQMGLDKTM

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=207, Percent_Identity=31.8840579710145, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325378, Length=204, Percent_Identity=30.3921568627451, Blast_Score=108, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6324997, Length=204, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 23825; Mature: 23825

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTYWRTYTEHLFVQKMADGSLPKSSFQHYLKQDYLYLYQYCRALSLGVYKAENFDQMR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YALDATQAILNEVELHLQFCREWGIEEQEVRKTPESSACVAYTRYVLDCGMRGGLADLFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
AIAPCAIGYAEIGKKLAQTAVENTPYQAWIDTYAAPEYQAAVAKLADFLNQLCENLSLEQ
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
LTKLQEIFTTATRMEVAFWQMGLDKTM
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSTYWRTYTEHLFVQKMADGSLPKSSFQHYLKQDYLYLYQYCRALSLGVYKAENFDQMR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YALDATQAILNEVELHLQFCREWGIEEQEVRKTPESSACVAYTRYVLDCGMRGGLADLFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
AIAPCAIGYAEIGKKLAQTAVENTPYQAWIDTYAAPEYQAAVAKLADFLNQLCENLSLEQ
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH
LTKLQEIFTTATRMEVAFWQMGLDKTM
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]