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The map label for this gene is ykgE [H]

Identifier: 126207930

GI number: 126207930

Start: 512616

End: 513341

Strand: Reverse

Name: ykgE [H]

Synonym: APL_0446

Alternate gene names: 126207930

Gene position: 513341-512616 (Counterclockwise)

Preceding gene: 126207931

Following gene: 126207929

Centisome position: 22.57

GC content: 42.56

Gene sequence:

>726_bases
ATGAACGTAAATTTCTATGTGACCTGTATTGCCGACATTGTCAAAGCCGGCGTAGCAAAAAACAGCGTACTTTTACTCGA
AAAATTGGGTTGTAACGTTGTTTTCTTAGAGAAACAAGGCTGTTGCGGACAACCGGCAATGAACAGCGGCTATGCGAAAC
AAGCGATTCCGGGTATGAAAAACCTTATCGAAACTTTTGAGGTAAACGACTACCCTATCGTTGCACCGGCAGGTTCATGC
GTCTATGCAATCAAAAACTATGCGAAATACTTAAACCGTTTCGGCGAACCGGAATGGGCGAAACGTGCGGAAAAAATTGC
CGCACGTCTATACGATTTAACCGATTTTATCGTAAACGTATTAAAAAGAACGGATGTCGGCGCAAGCCTCACCGGTAAAG
CGGTTTACCACCCGTCTTGCAGCTTAAGTCGTAAACTTGGCATTGTGGACGAACCTCTCACCCTCTTAAAAAATGTTAAG
GGTTTAGAATTGCTACCGATTCACAACCAACAAACCTGTTGCGGTTTCGGCGGTACTTTCTCCGTCAAAATGGCTGAAAT
CTCAGGTGAAATGGTTACTGAAAAAGTGGTTAATATTACTGAAGTTGAACCTGAATATCTGGTTGGAGCGGATGTTAGTT
GCTTAATTAACATTGCCGGTCGTTTAAACCGTGAAGGTAAAAACGTAAAAGTTATGCACATCGCAGAAGTATTAATGCAA
GAGTAA

Upstream 100 bases:

>100_bases
CTACCTATATTAAGTAAAAGGAAGTCAGCTGACTTCCTTTTGTCATTTTTGGCATTTTAAATACGATTGTTTCTTATTTT
TATTTAAGTGGGAATTCTTT

Downstream 100 bases:

>100_bases
GGAAGCCCTATGTCACATTTACAAACCAGTACCCTACCCTTTAAGCAACGTGTAGAACAGCAAGTTCATAACGACATCAT
GCGCAAGGCGGTGGTAAAAG

Product: putative dehydrogenase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNVNFYVTCIADIVKAGVAKNSVLLLEKLGCNVVFLEKQGCCGQPAMNSGYAKQAIPGMKNLIETFEVNDYPIVAPAGSC
VYAIKNYAKYLNRFGEPEWAKRAEKIAARLYDLTDFIVNVLKRTDVGASLTGKAVYHPSCSLSRKLGIVDEPLTLLKNVK
GLELLPIHNQQTCCGFGGTFSVKMAEISGEMVTEKVVNITEVEPEYLVGADVSCLINIAGRLNREGKNVKVMHIAEVLMQ
E

Sequences:

>Translated_241_residues
MNVNFYVTCIADIVKAGVAKNSVLLLEKLGCNVVFLEKQGCCGQPAMNSGYAKQAIPGMKNLIETFEVNDYPIVAPAGSC
VYAIKNYAKYLNRFGEPEWAKRAEKIAARLYDLTDFIVNVLKRTDVGASLTGKAVYHPSCSLSRKLGIVDEPLTLLKNVK
GLELLPIHNQQTCCGFGGTFSVKMAEISGEMVTEKVVNITEVEPEYLVGADVSCLINIAGRLNREGKNVKVMHIAEVLMQ
E
>Mature_241_residues
MNVNFYVTCIADIVKAGVAKNSVLLLEKLGCNVVFLEKQGCCGQPAMNSGYAKQAIPGMKNLIETFEVNDYPIVAPAGSC
VYAIKNYAKYLNRFGEPEWAKRAEKIAARLYDLTDFIVNVLKRTDVGASLTGKAVYHPSCSLSRKLGIVDEPLTLLKNVK
GLELLPIHNQQTCCGFGGTFSVKMAEISGEMVTEKVVNITEVEPEYLVGADVSCLINIAGRLNREGKNVKVMHIAEVLMQ
E

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family [H]

Homologues:

Organism=Escherichia coli, GI1786497, Length=241, Percent_Identity=72.6141078838174, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1788576, Length=192, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 26353; Mature: 26353

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNFYVTCIADIVKAGVAKNSVLLLEKLGCNVVFLEKQGCCGQPAMNSGYAKQAIPGMK
CCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHH
NLIETFEVNDYPIVAPAGSCVYAIKNYAKYLNRFGEPEWAKRAEKIAARLYDLTDFIVNV
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKRTDVGASLTGKAVYHPSCSLSRKLGIVDEPLTLLKNVKGLELLPIHNQQTCCGFGGTF
HHHCCCCCCCCCCEEECCCCCHHHCCCCCCCHHHHHCCCCCCEEEECCCCCCEECCCCEE
SVKMAEISGEMVTEKVVNITEVEPEYLVGADVSCLINIAGRLNREGKNVKVMHIAEVLMQ
EEEEEHHCCHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
E
C
>Mature Secondary Structure
MNVNFYVTCIADIVKAGVAKNSVLLLEKLGCNVVFLEKQGCCGQPAMNSGYAKQAIPGMK
CCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHH
NLIETFEVNDYPIVAPAGSCVYAIKNYAKYLNRFGEPEWAKRAEKIAARLYDLTDFIVNV
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LKRTDVGASLTGKAVYHPSCSLSRKLGIVDEPLTLLKNVKGLELLPIHNQQTCCGFGGTF
HHHCCCCCCCCCCEEECCCCCHHHCCCCCCCHHHHHCCCCCCEEEECCCCCCEECCCCEE
SVKMAEISGEMVTEKVVNITEVEPEYLVGADVSCLINIAGRLNREGKNVKVMHIAEVLMQ
EEEEEHHCCHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]