Click here to switch to the map view.

The map label for this gene is yigL [C]

Identifier: 126207876

GI number: 126207876

Start: 445790

End: 446605

Strand: Reverse

Name: yigL [C]

Synonym: APL_0392

Alternate gene names: 126207876

Gene position: 446605-445790 (Counterclockwise)

Preceding gene: 126207883

Following gene: 126207875

Centisome position: 19.64

GC content: 41.3

Gene sequence:

>816_bases
ATGACTCACCCGTTTCGCGCCATTGTTTCCGATTTAGACGGAACACTTCTGAATGCCGACCATAAAATAGGTCAATATAC
GATAGAAACGTTAAGCAAACTCTCTCAACAAGGTATCGATATTTTTTTCGCAACGGGGCGAAATTATCCCGATGTAAAAC
ATATCATTAGCAAAGTGAATGTGGATGAAGCGATGCTCATTACCTCTAACGGCGCCAGAGCGAATTTTCTTTCCGGTCAG
ACCGTATTAAATCACTACCTTCCGGAAGATATTGCATTTCAGCTGATGAATATCCCTTTCGACAGTAATAGAGTTTGTCT
TAACAGCTACCAAGGCGACGAATGGTTTATCAATGTCGATATCGAACAGTTAAAAAAATATCACAAAGATTCCGGCTATT
CCTATCAAGTCGTTGATTTCAGCAAACACCACGGGCGTCAAACCGAGAAAGTTTTCTTTATCGGTAAGGCTCCGGAAGAT
CTCGTCCCAATCGAACAATATATTAAAGCGAAGTTTGGCGACCGAATTTATATGACCTATTCCGCGCTGCTCTGTTTGGA
AGTAATGAACAAATCCGTATCAAAAGGCAATGCGCTTGAAGAATTGGTAAAACTAAGAGGCTACGAGTTAAAAGATTGTT
TGGCATTCGGCGATGGTATGAACGATATAGAAATGCTTTCCAAAGTGGGGAAAGGTTGTATTATGCGGAATGCGGATAAG
CGTTTAATTCAAGCGTTACCTCAACATGAAATTATCGGCAATAATGCGCATGAATCGGTCGCCGCTTATATACGGGCTAC
ATTCAGTATCCTCTGA

Upstream 100 bases:

>100_bases
GATTACGGTAGTAGAAATTCGCTATTTTCTTTGAAGAAACCGGTCAAATTTGTTAGCCTTAAATCAAATTATAATCAGAA
TAAATTTATAAGGATCTTTT

Downstream 100 bases:

>100_bases
TCGTTTATCTATTAACAAGCGGTCTGATAACCGAACGATATTGCAAATTTTTGGTCTTAACAGACCGCATATTACCTAGA
CATTATCGGAAAACAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTHPFRAIVSDLDGTLLNADHKIGQYTIETLSKLSQQGIDIFFATGRNYPDVKHIISKVNVDEAMLITSNGARANFLSGQ
TVLNHYLPEDIAFQLMNIPFDSNRVCLNSYQGDEWFINVDIEQLKKYHKDSGYSYQVVDFSKHHGRQTEKVFFIGKAPED
LVPIEQYIKAKFGDRIYMTYSALLCLEVMNKSVSKGNALEELVKLRGYELKDCLAFGDGMNDIEMLSKVGKGCIMRNADK
RLIQALPQHEIIGNNAHESVAAYIRATFSIL

Sequences:

>Translated_271_residues
MTHPFRAIVSDLDGTLLNADHKIGQYTIETLSKLSQQGIDIFFATGRNYPDVKHIISKVNVDEAMLITSNGARANFLSGQ
TVLNHYLPEDIAFQLMNIPFDSNRVCLNSYQGDEWFINVDIEQLKKYHKDSGYSYQVVDFSKHHGRQTEKVFFIGKAPED
LVPIEQYIKAKFGDRIYMTYSALLCLEVMNKSVSKGNALEELVKLRGYELKDCLAFGDGMNDIEMLSKVGKGCIMRNADK
RLIQALPQHEIIGNNAHESVAAYIRATFSIL
>Mature_270_residues
THPFRAIVSDLDGTLLNADHKIGQYTIETLSKLSQQGIDIFFATGRNYPDVKHIISKVNVDEAMLITSNGARANFLSGQT
VLNHYLPEDIAFQLMNIPFDSNRVCLNSYQGDEWFINVDIEQLKKYHKDSGYSYQVVDFSKHHGRQTEKVFFIGKAPEDL
VPIEQYIKAKFGDRIYMTYSALLCLEVMNKSVSKGNALEELVKLRGYELKDCLAFGDGMNDIEMLSKVGKGCIMRNADKR
LIQALPQHEIIGNNAHESVAAYIRATFSIL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=264, Percent_Identity=43.5606060606061, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI87081741, Length=259, Percent_Identity=36.6795366795367, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30636; Mature: 30505

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPFRAIVSDLDGTLLNADHKIGQYTIETLSKLSQQGIDIFFATGRNYPDVKHIISKVN
CCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCC
VDEAMLITSNGARANFLSGQTVLNHYLPEDIAFQLMNIPFDSNRVCLNSYQGDEWFINVD
CCCEEEEECCCCCCEECCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEECC
IEQLKKYHKDSGYSYQVVDFSKHHGRQTEKVFFIGKAPEDLVPIEQYIKAKFGDRIYMTY
HHHHHHHHCCCCCEEEEEECHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCEEHHHH
SALLCLEVMNKSVSKGNALEELVKLRGYELKDCLAFGDGMNDIEMLSKVGKGCIMRNADK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCHHH
RLIQALPQHEIIGNNAHESVAAYIRATFSIL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
THPFRAIVSDLDGTLLNADHKIGQYTIETLSKLSQQGIDIFFATGRNYPDVKHIISKVN
CCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCC
VDEAMLITSNGARANFLSGQTVLNHYLPEDIAFQLMNIPFDSNRVCLNSYQGDEWFINVD
CCCEEEEECCCCCCEECCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEECC
IEQLKKYHKDSGYSYQVVDFSKHHGRQTEKVFFIGKAPEDLVPIEQYIKAKFGDRIYMTY
HHHHHHHHCCCCCEEEEEECHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCEEHHHH
SALLCLEVMNKSVSKGNALEELVKLRGYELKDCLAFGDGMNDIEMLSKVGKGCIMRNADK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCHHH
RLIQALPQHEIIGNNAHESVAAYIRATFSIL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]