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The map label for this gene is ompP4 [H]

Identifier: 126207873

GI number: 126207873

Start: 442506

End: 443321

Strand: Reverse

Name: ompP4 [H]

Synonym: APL_0389

Alternate gene names: 126207873

Gene position: 443321-442506 (Counterclockwise)

Preceding gene: 126207875

Following gene: 126207872

Centisome position: 19.49

GC content: 43.5

Gene sequence:

>816_bases
ATGAAATTGTTTAAATTAACCGGTTTAGCGGTCGCTTCCGCATTTATCTTAACCGCTTGCGCTCATCACGATACGAGCAA
TCATGATGAAATGATCTTACAAGAACAAGCGGCATTAGGTCTTAACTGGGTACAACAATCCGGTGAATATCAAGCACTTG
CGCATCAAGCGTTCAACACGGCTAAAGTCGCATTTGATCAAGCAAAAGTCGCTAAAGGTAAGAAAAAAGCGGTTGTGGTC
GATTTAGACGAAACCATGGTGGATAACAGCGCCTATGCCGGCTGGCAAGTCAAAAATCATAAAGCCTTCGACGGCGAGAG
CTGGACTCGCTGGGTAAATGCCCGTCAAACGCAAGCGATTGCCGGTGCTGTAGAATTCAATAATTACGTGAACAGCCACA
AAGGTACGATGTTCTACGTATCAAACCGCAAAGACAACGGTGAAAAAGCCGGTACGTTAGACGATATGAAAAAATTAGGC
TTTACCGGTGTCAGCGAACAAACCCTTTTCCTCAAAAAGGACAAATCGAACAAAACCCCTCGCTTTGAAGAAATTGAAAA
ACAAGGTTATGAAATCGTGCTTTACCTTGGCGATAACTTAAATGACTTCGGCGATGCGACCTACAAAAAATCCAATGCGG
AACGCCGTGATTTTGTTGCGGCAAATAAAGACAAATTCGGTAAAAAATTTATCGTACTTCCTAACCCGAACTACGGCGAC
TGGGAAGGCGGTTTAGATAAAAACTACTATAAAGGCGATGCGAAAAGCCGTTTAGATATTCGTCACGGTGCAATTAAGGC
TTGGGACGGCAAATAA

Upstream 100 bases:

>100_bases
AAATGTGAATAGACAAGCATTCGCATTCTTTGTACCCTTTACAAACTTTTAACTGATTACGTTAAAAGAGATTTAAAGCA
ACAAAACGAAGGAGAAAACA

Downstream 100 bases:

>100_bases
TTTATCTTATCAAATTCACTTCCGAAGACCGCCACAAGCGGTCTTTTTTCTATCTCTCTTTACAAAATTTTGCTAGGATT
GAACCGCTTATTTTAACCTA

Product: lipoprotein E precursor

Products: NA

Alternate protein names: Outer membrane protein P4; OMP P4 [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLFKLTGLAVASAFILTACAHHDTSNHDEMILQEQAALGLNWVQQSGEYQALAHQAFNTAKVAFDQAKVAKGKKKAVVV
DLDETMVDNSAYAGWQVKNHKAFDGESWTRWVNARQTQAIAGAVEFNNYVNSHKGTMFYVSNRKDNGEKAGTLDDMKKLG
FTGVSEQTLFLKKDKSNKTPRFEEIEKQGYEIVLYLGDNLNDFGDATYKKSNAERRDFVAANKDKFGKKFIVLPNPNYGD
WEGGLDKNYYKGDAKSRLDIRHGAIKAWDGK

Sequences:

>Translated_271_residues
MKLFKLTGLAVASAFILTACAHHDTSNHDEMILQEQAALGLNWVQQSGEYQALAHQAFNTAKVAFDQAKVAKGKKKAVVV
DLDETMVDNSAYAGWQVKNHKAFDGESWTRWVNARQTQAIAGAVEFNNYVNSHKGTMFYVSNRKDNGEKAGTLDDMKKLG
FTGVSEQTLFLKKDKSNKTPRFEEIEKQGYEIVLYLGDNLNDFGDATYKKSNAERRDFVAANKDKFGKKFIVLPNPNYGD
WEGGLDKNYYKGDAKSRLDIRHGAIKAWDGK
>Mature_271_residues
MKLFKLTGLAVASAFILTACAHHDTSNHDEMILQEQAALGLNWVQQSGEYQALAHQAFNTAKVAFDQAKVAKGKKKAVVV
DLDETMVDNSAYAGWQVKNHKAFDGESWTRWVNARQTQAIAGAVEFNNYVNSHKGTMFYVSNRKDNGEKAGTLDDMKKLG
FTGVSEQTLFLKKDKSNKTPRFEEIEKQGYEIVLYLGDNLNDFGDATYKKSNAERRDFVAANKDKFGKKFIVLPNPNYGD
WEGGLDKNYYKGDAKSRLDIRHGAIKAWDGK

Specific function: Unknown

COG id: COG2503

COG function: function code R; Predicted secreted acid phosphatase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005519
- InterPro:   IPR023214
- InterPro:   IPR006423 [H]

Pfam domain/function: PF03767 Acid_phosphat_B [H]

EC number: NA

Molecular weight: Translated: 30391; Mature: 30391

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFKLTGLAVASAFILTACAHHDTSNHDEMILQEQAALGLNWVQQSGEYQALAHQAFNT
CCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKVAFDQAKVAKGKKKAVVVDLDETMVDNSAYAGWQVKNHKAFDGESWTRWVNARQTQAI
HHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
AGAVEFNNYVNSHKGTMFYVSNRKDNGEKAGTLDDMKKLGFTGVSEQTLFLKKDKSNKTP
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCC
RFEEIEKQGYEIVLYLGDNLNDFGDATYKKSNAERRDFVAANKDKFGKKFIVLPNPNYGD
CHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCHHHHEECCCCCCCCEEEEECCCCCCC
WEGGLDKNYYKGDAKSRLDIRHGAIKAWDGK
CCCCCCCCCCCCCCCCEEEECCCCEEECCCC
>Mature Secondary Structure
MKLFKLTGLAVASAFILTACAHHDTSNHDEMILQEQAALGLNWVQQSGEYQALAHQAFNT
CCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKVAFDQAKVAKGKKKAVVVDLDETMVDNSAYAGWQVKNHKAFDGESWTRWVNARQTQAI
HHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
AGAVEFNNYVNSHKGTMFYVSNRKDNGEKAGTLDDMKKLGFTGVSEQTLFLKKDKSNKTP
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCC
RFEEIEKQGYEIVLYLGDNLNDFGDATYKKSNAERRDFVAANKDKFGKKFIVLPNPNYGD
CHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCHHHHEECCCCCCCCEEEEECCCCCCC
WEGGLDKNYYKGDAKSRLDIRHGAIKAWDGK
CCCCCCCCCCCCCCCCEEEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1715322; 7542800 [H]