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The map label for this gene is yoaB [C]

Identifier: 126207559

GI number: 126207559

Start: 83718

End: 84062

Strand: Reverse

Name: yoaB [C]

Synonym: APL_0071

Alternate gene names: 126207559

Gene position: 84062-83718 (Counterclockwise)

Preceding gene: 126207560

Following gene: 126207558

Centisome position: 3.7

GC content: 44.06

Gene sequence:

>345_bases
ATGATTCAACGTATTGATGTCAGTAAACGTTTCTCTGAAGTCGCGATTTATAACGGCGTGGCTTATCTTGCAGGCCAAGT
GCCGACGGACGATAGCCAAGACGCTTATCAACAAACCAAACAAGTATTGGCGGAAATTGATAAATGCTTAGCTAAAGCCA
ATACCGATAAAAGTAAGATCTTAATAGCGACCGTCTATCTTGCGAATATGGCTTATTATGATGAAATGAACCGTGCTTGG
GACGAATGGGCAGCGGAAAATAATGCGCCGCCACGTGCTGCGGTGGAAGCAAGACTGGCAAATCCGAATTGGAAGGTTGA
AATTGTCGTTACTGCAGCCATTTAA

Upstream 100 bases:

>100_bases
TTAAAGTAGAATAAGCCGATTTAAGCTATGCAAGCGGTAAAATTTTGCAATTTTTTTGCAAATTTCTACCGCTTGTTTTC
TTTCAAACATAAGGAATATT

Downstream 100 bases:

>100_bases
TAACAAGGCGTAAGTATTGGCTTACGCTCCGTGCTTAGCCTGAAAGGAGGGAAAATGAAAGTATTTCATCGACACGCTCA
TATTTTCTTTATTGGCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIQRIDVSKRFSEVAIYNGVAYLAGQVPTDDSQDAYQQTKQVLAEIDKCLAKANTDKSKILIATVYLANMAYYDEMNRAW
DEWAAENNAPPRAAVEARLANPNWKVEIVVTAAI

Sequences:

>Translated_114_residues
MIQRIDVSKRFSEVAIYNGVAYLAGQVPTDDSQDAYQQTKQVLAEIDKCLAKANTDKSKILIATVYLANMAYYDEMNRAW
DEWAAENNAPPRAAVEARLANPNWKVEIVVTAAI
>Mature_114_residues
MIQRIDVSKRFSEVAIYNGVAYLAGQVPTDDSQDAYQQTKQVLAEIDKCLAKANTDKSKILIATVYLANMAYYDEMNRAW
DEWAAENNAPPRAAVEARLANPNWKVEIVVTAAI

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=113, Percent_Identity=45.1327433628319, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12737; Mature: 12737

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRIDVSKRFSEVAIYNGVAYLAGQVPTDDSQDAYQQTKQVLAEIDKCLAKANTDKSKI
CCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LIATVYLANMAYYDEMNRAWDEWAAENNAPPRAAVEARLANPNWKVEIVVTAAI
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MIQRIDVSKRFSEVAIYNGVAYLAGQVPTDDSQDAYQQTKQVLAEIDKCLAKANTDKSKI
CCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LIATVYLANMAYYDEMNRAWDEWAAENNAPPRAAVEARLANPNWKVEIVVTAAI
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA