| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207558
Identifier: 126207558
GI number: 126207558
Start: 83031
End: 83663
Strand: Reverse
Name: 126207558
Synonym: APL_0070
Alternate gene names: NA
Gene position: 83663-83031 (Counterclockwise)
Preceding gene: 126207559
Following gene: 126207557
Centisome position: 3.68
GC content: 40.44
Gene sequence:
>633_bases ATGAAAGTATTTCATCGACACGCTCATATTTTCTTTATTGGCGGAGCCGCCGACCTTGAACCCTATTACTTTGTCGGGCC ACTGCACAATATTACGATTGCACAAAAAAAATTAGCCCGCCAAGTCAAAAAATACTTAGCACATCATGCTAATATTCATT TCCATTCTCTAAGTTATAATCGTGTTTATTATTTAAGCGATATCGAGTTAAACGTCTTAGTCAAAATCCAGTCGCAAGAT CTGATTTACATTATCGGACACAGTTTAGGCGGCTGGAATGCCGCGCATTTAGCGCGAATTCTAAAAGATAAAGGCTACCG AGTTCGTATTCTTGCAACACTTGATCCGGTTGGGGAAGGTACGCTGGTTTGGATGGGGTCAAATATTTTTAAAAATCCGG AACCGAAGCCGCTTGCCGACTTTTGGATAAATATTCAAGCGGAAAACGACGATTTGGATCTCTCGGATATTGTGGCGCAA ATAGGTCGTCAATGGCTCCTTAGCGATGAGCCTGACATCAACGAAAAGCTATACATTCATCATTCGGATGCTCAACGTAT GCTAAGACACAAATTACATACCGGCAAATCCATTATGGACTATATCATCGAAAATATTCGACAACTTTTATAA
Upstream 100 bases:
>100_bases AAATCCGAATTGGAAGGTTGAAATTGTCGTTACTGCAGCCATTTAATAACAAGGCGTAAGTATTGGCTTACGCTCCGTGC TTAGCCTGAAAGGAGGGAAA
Downstream 100 bases:
>100_bases CTGCGACGATTCTTACTTTACGATTGTCCGATAATTATTTTAGAATATAAATTAAATTCTTATAACAAGGACAAACAATG AATATCAGCGAAAAATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKVFHRHAHIFFIGGAADLEPYYFVGPLHNITIAQKKLARQVKKYLAHHANIHFHSLSYNRVYYLSDIELNVLVKIQSQD LIYIIGHSLGGWNAAHLARILKDKGYRVRILATLDPVGEGTLVWMGSNIFKNPEPKPLADFWINIQAENDDLDLSDIVAQ IGRQWLLSDEPDINEKLYIHHSDAQRMLRHKLHTGKSIMDYIIENIRQLL
Sequences:
>Translated_210_residues MKVFHRHAHIFFIGGAADLEPYYFVGPLHNITIAQKKLARQVKKYLAHHANIHFHSLSYNRVYYLSDIELNVLVKIQSQD LIYIIGHSLGGWNAAHLARILKDKGYRVRILATLDPVGEGTLVWMGSNIFKNPEPKPLADFWINIQAENDDLDLSDIVAQ IGRQWLLSDEPDINEKLYIHHSDAQRMLRHKLHTGKSIMDYIIENIRQLL >Mature_210_residues MKVFHRHAHIFFIGGAADLEPYYFVGPLHNITIAQKKLARQVKKYLAHHANIHFHSLSYNRVYYLSDIELNVLVKIQSQD LIYIIGHSLGGWNAAHLARILKDKGYRVRILATLDPVGEGTLVWMGSNIFKNPEPKPLADFWINIQAENDDLDLSDIVAQ IGRQWLLSDEPDINEKLYIHHSDAQRMLRHKLHTGKSIMDYIIENIRQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24279; Mature: 24279
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFHRHAHIFFIGGAADLEPYYFVGPLHNITIAQKKLARQVKKYLAHHANIHFHSLSYN CCEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC RVYYLSDIELNVLVKIQSQDLIYIIGHSLGGWNAAHLARILKDKGYRVRILATLDPVGEG EEEEEECCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC TLVWMGSNIFKNPEPKPLADFWINIQAENDDLDLSDIVAQIGRQWLLSDEPDINEKLYIH EEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCHHCCCCCCCCCCCEEEEE HSDAQRMLRHKLHTGKSIMDYIIENIRQLL ECHHHHHHHHHHCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKVFHRHAHIFFIGGAADLEPYYFVGPLHNITIAQKKLARQVKKYLAHHANIHFHSLSYN CCEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC RVYYLSDIELNVLVKIQSQDLIYIIGHSLGGWNAAHLARILKDKGYRVRILATLDPVGEG EEEEEECCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC TLVWMGSNIFKNPEPKPLADFWINIQAENDDLDLSDIVAQIGRQWLLSDEPDINEKLYIH EEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCHHCCCCCCCCCCCEEEEE HSDAQRMLRHKLHTGKSIMDYIIENIRQLL ECHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA