Click here to switch to the map view.

The map label for this gene is yfhL [C]

Identifier: 126207546

GI number: 126207546

Start: 63853

End: 64113

Strand: Reverse

Name: yfhL [C]

Synonym: APL_0058

Alternate gene names: 126207546

Gene position: 64113-63853 (Counterclockwise)

Preceding gene: 126207547

Following gene: 126207543

Centisome position: 2.82

GC content: 41.38

Gene sequence:

>261_bases
ATGGCTTTACTGATTACCCACAAATGTACCAACTGTGATATGTGCTTACCCGAATGCCCGAATGAAGCGATTTCAATCGG
CGATGATGTGTATGTGATTGATCCGGTGCTATGTACCGAATGTGTCGGACATTATGAAAAGCCGACCTGTCAAAAAGTTT
GCCCGATTACCAACTGTATTATTCCGGATTCGGAACATCAAGAAACGCAAGAAGAGTTATGGGAAAGATTTGTGATGATT
CATCACCCGGATAAAATATAA

Upstream 100 bases:

>100_bases
GCTTACTTGTACCGCTTAACTATGCAAGTCTATGTAAAATCCATTCCTATTTTTATCTTTATCTGTATAATCGCTCACTT
TTTAGAATACGTTTGAATTT

Downstream 100 bases:

>100_bases
AAATAAAACGTAAAAAAACGGAGAATGAACCTTCATTCTCCGTTTTTTGTTATGCGTCTTTAAAGCTATAAGGCAAATCG
CAAATTGCTAATGGAACTCC

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MALLITHKCTNCDMCLPECPNEAISIGDDVYVIDPVLCTECVGHYEKPTCQKVCPITNCIIPDSEHQETQEELWERFVMI
HHPDKI

Sequences:

>Translated_86_residues
MALLITHKCTNCDMCLPECPNEAISIGDDVYVIDPVLCTECVGHYEKPTCQKVCPITNCIIPDSEHQETQEELWERFVMI
HHPDKI
>Mature_85_residues
ALLITHKCTNCDMCLPECPNEAISIGDDVYVIDPVLCTECVGHYEKPTCQKVCPITNCIIPDSEHQETQEELWERFVMIH
HPDKI

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=69.7674418604651, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9829; Mature: 9698

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
10.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLITHKCTNCDMCLPECPNEAISIGDDVYVIDPVLCTECVGHYEKPTCQKVCPITNCI
CEEEEECCCCCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHCCCCCCCCHHHCCCCCCC
IPDSEHQETQEELWERFVMIHHPDKI
CCCCCCHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
ALLITHKCTNCDMCLPECPNEAISIGDDVYVIDPVLCTECVGHYEKPTCQKVCPITNCI
EEEEECCCCCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHCCCCCCCCHHHCCCCCCC
IPDSEHQETQEELWERFVMIHHPDKI
CCCCCCHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]