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The map label for this gene is yecM [C]

Identifier: 126207526

GI number: 126207526

Start: 41660

End: 42256

Strand: Reverse

Name: yecM [C]

Synonym: APL_0038

Alternate gene names: 126207526

Gene position: 42256-41660 (Counterclockwise)

Preceding gene: 126207530

Following gene: 126207525

Centisome position: 1.86

GC content: 37.52

Gene sequence:

>597_bases
ATGATACAAGAAAATGCAAAATTTTACGAGAAAATGACCGCTTGTTTTGGCGATTTTTCTGAATTTCAACAAAAAATTCA
GCAAATAGCTCATTTGGCAATGTTGGATTTGAGTCAATTTGAAATTGACCATTTAGCGGTCAGAATGAATGAGTGGCAAA
CCGCCGAACGGTGGCGTTCGATCTTGCTAGAAAACAGTGAATTGTTGAAAGAAAGCGAAGTAAACGGACGGCCGATAGCC
CTTATCAAACTCAATCAGCCGTTGTCTTTTTTAGGACAATCGGTTTCAATTATCGAATTACCGTTTCCTAAAGATAAAGT
TTATCCGCAACAAGGTTGGGAACATATTGAAATCGTTTATCCGATGAAGCCAAACGAAACGGTTGAGCAATGGGTTCAGC
GCACCTTAAAACAGTTTCATTTAACGATTAATGCCAATCTTGATCTTAAGATCAGTCAGCCTAAAGTAGCAGGCGAACGT
TTACCGAATCCGAGTATTGCAATTTCGTTAAAAAATAAAACTTATTGTAATCCTTGTTGTCTAAAGCTCCACCCTTATGG
TATAACTGAAATTATTCATTCAGGGAGTAATTTCTGA

Upstream 100 bases:

>100_bases
CACGAATCTATAACCTTTTTCAACGTGCTATTTTTGCACGACATTTAATTTAAAAAATCCGAAGAGTGCGTCAAATCGCA
CCTAAAAGGGAAAACGCTCT

Downstream 100 bases:

>100_bases
GCAATTTTTCATTGGAGAAGAAAAATATGAAAAAATTTAGTTTAGCAGCGGCTTTATTTACAAGTTTAACCCTTGTCGGT
TGTGCAAATACCGATATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MIQENAKFYEKMTACFGDFSEFQQKIQQIAHLAMLDLSQFEIDHLAVRMNEWQTAERWRSILLENSELLKESEVNGRPIA
LIKLNQPLSFLGQSVSIIELPFPKDKVYPQQGWEHIEIVYPMKPNETVEQWVQRTLKQFHLTINANLDLKISQPKVAGER
LPNPSIAISLKNKTYCNPCCLKLHPYGITEIIHSGSNF

Sequences:

>Translated_198_residues
MIQENAKFYEKMTACFGDFSEFQQKIQQIAHLAMLDLSQFEIDHLAVRMNEWQTAERWRSILLENSELLKESEVNGRPIA
LIKLNQPLSFLGQSVSIIELPFPKDKVYPQQGWEHIEIVYPMKPNETVEQWVQRTLKQFHLTINANLDLKISQPKVAGER
LPNPSIAISLKNKTYCNPCCLKLHPYGITEIIHSGSNF
>Mature_198_residues
MIQENAKFYEKMTACFGDFSEFQQKIQQIAHLAMLDLSQFEIDHLAVRMNEWQTAERWRSILLENSELLKESEVNGRPIA
LIKLNQPLSFLGQSVSIIELPFPKDKVYPQQGWEHIEIVYPMKPNETVEQWVQRTLKQFHLTINANLDLKISQPKVAGER
LPNPSIAISLKNKTYCNPCCLKLHPYGITEIIHSGSNF

Specific function: Unknown

COG id: COG3102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yecM [H]

Homologues:

Organism=Escherichia coli, GI87081996, Length=190, Percent_Identity=35.7894736842105, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010393 [H]

Pfam domain/function: PF06185 YecM [H]

EC number: NA

Molecular weight: Translated: 22910; Mature: 22910

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQENAKFYEKMTACFGDFSEFQQKIQQIAHLAMLDLSQFEIDHLAVRMNEWQTAERWRS
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
ILLENSELLKESEVNGRPIALIKLNQPLSFLGQSVSIIELPFPKDKVYPQQGWEHIEIVY
HHHCCHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEE
PMKPNETVEQWVQRTLKQFHLTINANLDLKISQPKVAGERLPNPSIAISLKNKTYCNPCC
ECCCCHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCHHCCCCCCEEEEECCCCCCCCEE
LKLHPYGITEIIHSGSNF
EEECCCCHHHHHHCCCCC
>Mature Secondary Structure
MIQENAKFYEKMTACFGDFSEFQQKIQQIAHLAMLDLSQFEIDHLAVRMNEWQTAERWRS
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
ILLENSELLKESEVNGRPIALIKLNQPLSFLGQSVSIIELPFPKDKVYPQQGWEHIEIVY
HHHCCHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEE
PMKPNETVEQWVQRTLKQFHLTINANLDLKISQPKVAGERLPNPSIAISLKNKTYCNPCC
ECCCCHHHHHHHHHHHHHEEEEEECCEEEEECCCCCCHHCCCCCCEEEEECCCCCCCCEE
LKLHPYGITEIIHSGSNF
EEECCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]