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The map label for this gene is fliS [H]

Identifier: 126176142

GI number: 126176142

Start: 4646402

End: 4646782

Strand: Reverse

Name: fliS [H]

Synonym: Sbal_3954

Alternate gene names: 126176142

Gene position: 4646782-4646402 (Counterclockwise)

Preceding gene: 126176143

Following gene: 126176141

Centisome position: 90.63

GC content: 45.93

Gene sequence:

>381_bases
ATGTTAAACGAGTACGATCCATTTAATGCCTACAAGCAAACCGCGTTAGATGCACAAGTAGCGGCAGCCACAACCCATGA
CATGGTGCGTATGCTACTTGATGGTTTATTGGAAGAACTAGAGCGGACCGCTGGCCATATGGAATACCAAAGGTATGAGG
CGAAAGGCATGAGTATCCACAAGTGCCTTAACATAGTGCATGGACTGGACTCTATGCTGGACCTTGAAAATGGTGGTGAG
GTTGCAGTGAGCTTACATCGTCTCTATGACTTCTGTAGCCGTCAGCTTGTCAGTGCCAGTGTCGAAAATAGTGCAGAAGC
TCTGGTTCCAATTACTCAGGTGATTACTAATGTCAGAGAAGGATGGGCAAATCTCAATTAA

Upstream 100 bases:

>100_bases
CAAAAGTATCAGATTTATTTGACGCAATTTACGGCAATGGAAGCGACGATTAATCAATTTAGCGCTGCGAGTGGGCTATT
TAGCTAGGAAATTATTACCA

Downstream 100 bases:

>100_bases
GCAATGGGCGCGTTTTGCGAGTGCTCTGCGCCAATATGCAGATGCTCAGGATTGGGAAAATGTCCGAAAAGTGAATATCG
CTTTGATTAAGGCACTGCAA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLNEYDPFNAYKQTALDAQVAAATTHDMVRMLLDGLLEELERTAGHMEYQRYEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAVSLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWANLN

Sequences:

>Translated_126_residues
MLNEYDPFNAYKQTALDAQVAAATTHDMVRMLLDGLLEELERTAGHMEYQRYEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAVSLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWANLN
>Mature_126_residues
MLNEYDPFNAYKQTALDAQVAAATTHDMVRMLLDGLLEELERTAGHMEYQRYEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAVSLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWANLN

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=114, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14083; Mature: 14083

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEYDPFNAYKQTALDAQVAAATTHDMVRMLLDGLLEELERTAGHMEYQRYEAKGMSIH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KCLNIVHGLDSMLDLENGGEVAVSLHRLYDFCSRQLVSASVENSAEALVPITQVITNVRE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GWANLN
HHCCCC
>Mature Secondary Structure
MLNEYDPFNAYKQTALDAQVAAATTHDMVRMLLDGLLEELERTAGHMEYQRYEAKGMSIH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KCLNIVHGLDSMLDLENGGEVAVSLHRLYDFCSRQLVSASVENSAEALVPITQVITNVRE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GWANLN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]