Click here to switch to the map view.

The map label for this gene is fliDL [H]

Identifier: 126176143

GI number: 126176143

Start: 4646796

End: 4648142

Strand: Reverse

Name: fliDL [H]

Synonym: Sbal_3955

Alternate gene names: 126176143

Gene position: 4648142-4646796 (Counterclockwise)

Preceding gene: 126176144

Following gene: 126176142

Centisome position: 90.65

GC content: 41.5

Gene sequence:

>1347_bases
ATGATTTCAGGTATGAGTGCAGCACAATTTGCTCAGCAACTGATTGGCGCAGACCGCGCAGGTAAAGATACACTTTACAA
AGGTAAGCTAACAAACAGCAAAACGCAGTTAGATGCCTATACGTTGCTTGAAAATAATATGAAGAAAATGGCCACTAAGT
TGAGTGAAATTGGTGGTGATGCGACTAAAGGAAAAATTGCCACCGTTTCTGGCGATAATGCGACTGCGACCGTCAAATCT
GATGCACCTAAGGGTAATTATGATTTGAGCGTGCATAAGCTCGCACAAGCGCATCAGCTTACTAAAACCTATGCATCTGA
AAATGAGCTGTTACCGGCGTCAGGCGTAATAAGCATTCAAGTTGGTAGTGATCCGACCAAACGTATGGATATTGACTTAG
CAACCATTAATGGTGGTGCGGCTATTTCAGTTTCTCAATTACGCGATGTGATTAATAAGCAGGTGGGTAATCCTGGGGTG
CAGGCGTCATTAGTGCGCACCGGTAATCAAATCGAATTTATGCTGTCTTCAAAGGAATCGGGTGTTGCGAATCAAGTGAA
GGTAGAGTTTAACGGTGCCGATTGGGGCATGACAGAACGTCGTGCAGCACAAGATGCGGAACTCACATTAAACGGTATCG
ATATTACCAGCAGTAGTAACTATCTAGAGAATGTTGTTGATGGTGTCAGCCTTGAATTAGTTAAGGTGCATGCTGCGGGT
GATAGCAGCATGATTAAAGTGGCAGATGATTTCGAAGCGAATAAGAAAACGGTTAAAGATTTTGTCGATTCATTTAATTC
GTTAATGACACAAATTAACCAACTTACTCGTTCTATGGGAGTAAAAGCCTCTGATTCGAGTTCTTCGGATAAAGATAAAG
AAGACAAAACTACCGCTGTGAGTGAGGCGCAAATTGGTGTCTTGAAAGGCGATACGTCTCTTCGTTTATTGCAGTCTCGG
CTACGTGATTCAGTATTTACAACCGCTTCAAATGGGATGCGTTTGTCTGATATAGGAATTGAAATTGGCCGAGATGGAAA
ACTGAAAATTGATGATGCCAAGCTAACCGACAGTTTTAAAAGTGATCCCGAAAAAGTGCAAGCGATGTTTACGGGTGAAG
GTAGCTACGTCAAGAATGTTGAGAAAACATTAAAGCCTTTTACGCAGTTCAATGGCTATATCGATCAAAAACAAGAAGCG
TTAAATAAACAGATTAAAAGTGTGAATGACAGCATGGATCGTCATAACTATCAAATGAATCAAAAGTATCAGATTTATTT
GACGCAATTTACGGCAATGGAAGCGACGATTAATCAATTTAGCGCTGCGAGTGGGCTATTTAGCTAG

Upstream 100 bases:

>100_bases
AGTTTTTAGCTGTACTCAGGCCAGTTACCTATTTAATTTTCTTTAAAAACAGCAGCTTGTTTTTGGCATGCGTTTTGCTC
TAGAACGAGTGGAGGTAGTC

Downstream 100 bases:

>100_bases
GAAATTATTACCAATGTTAAACGAGTACGATCCATTTAATGCCTACAAGCAAACCGCGTTAGATGCACAAGTAGCGGCAG
CCACAACCCATGACATGGTG

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MISGMSAAQFAQQLIGADRAGKDTLYKGKLTNSKTQLDAYTLLENNMKKMATKLSEIGGDATKGKIATVSGDNATATVKS
DAPKGNYDLSVHKLAQAHQLTKTYASENELLPASGVISIQVGSDPTKRMDIDLATINGGAAISVSQLRDVINKQVGNPGV
QASLVRTGNQIEFMLSSKESGVANQVKVEFNGADWGMTERRAAQDAELTLNGIDITSSSNYLENVVDGVSLELVKVHAAG
DSSMIKVADDFEANKKTVKDFVDSFNSLMTQINQLTRSMGVKASDSSSSDKDKEDKTTAVSEAQIGVLKGDTSLRLLQSR
LRDSVFTTASNGMRLSDIGIEIGRDGKLKIDDAKLTDSFKSDPEKVQAMFTGEGSYVKNVEKTLKPFTQFNGYIDQKQEA
LNKQIKSVNDSMDRHNYQMNQKYQIYLTQFTAMEATINQFSAASGLFS

Sequences:

>Translated_448_residues
MISGMSAAQFAQQLIGADRAGKDTLYKGKLTNSKTQLDAYTLLENNMKKMATKLSEIGGDATKGKIATVSGDNATATVKS
DAPKGNYDLSVHKLAQAHQLTKTYASENELLPASGVISIQVGSDPTKRMDIDLATINGGAAISVSQLRDVINKQVGNPGV
QASLVRTGNQIEFMLSSKESGVANQVKVEFNGADWGMTERRAAQDAELTLNGIDITSSSNYLENVVDGVSLELVKVHAAG
DSSMIKVADDFEANKKTVKDFVDSFNSLMTQINQLTRSMGVKASDSSSSDKDKEDKTTAVSEAQIGVLKGDTSLRLLQSR
LRDSVFTTASNGMRLSDIGIEIGRDGKLKIDDAKLTDSFKSDPEKVQAMFTGEGSYVKNVEKTLKPFTQFNGYIDQKQEA
LNKQIKSVNDSMDRHNYQMNQKYQIYLTQFTAMEATINQFSAASGLFS
>Mature_448_residues
MISGMSAAQFAQQLIGADRAGKDTLYKGKLTNSKTQLDAYTLLENNMKKMATKLSEIGGDATKGKIATVSGDNATATVKS
DAPKGNYDLSVHKLAQAHQLTKTYASENELLPASGVISIQVGSDPTKRMDIDLATINGGAAISVSQLRDVINKQVGNPGV
QASLVRTGNQIEFMLSSKESGVANQVKVEFNGADWGMTERRAAQDAELTLNGIDITSSSNYLENVVDGVSLELVKVHAAG
DSSMIKVADDFEANKKTVKDFVDSFNSLMTQINQLTRSMGVKASDSSSSDKDKEDKTTAVSEAQIGVLKGDTSLRLLQSR
LRDSVFTTASNGMRLSDIGIEIGRDGKLKIDDAKLTDSFKSDPEKVQAMFTGEGSYVKNVEKTLKPFTQFNGYIDQKQEA
LNKQIKSVNDSMDRHNYQMNQKYQIYLTQFTAMEATINQFSAASGLFS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=391, Percent_Identity=28.3887468030691, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48493; Mature: 48493

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGMSAAQFAQQLIGADRAGKDTLYKGKLTNSKTQLDAYTLLENNMKKMATKLSEIGGD
CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ATKGKIATVSGDNATATVKSDAPKGNYDLSVHKLAQAHQLTKTYASENELLPASGVISIQ
CCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VGSDPTKRMDIDLATINGGAAISVSQLRDVINKQVGNPGVQASLVRTGNQIEFMLSSKES
ECCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCC
GVANQVKVEFNGADWGMTERRAAQDAELTLNGIDITSSSNYLENVVDGVSLELVKVHAAG
CCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCEEEEEEEEECC
DSSMIKVADDFEANKKTVKDFVDSFNSLMTQINQLTRSMGVKASDSSSSDKDKEDKTTAV
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
SEAQIGVLKGDTSLRLLQSRLRDSVFTTASNGMRLSDIGIEIGRDGKLKIDDAKLTDSFK
HHCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCEEECCCHHCCHHC
SDPEKVQAMFTGEGSYVKNVEKTLKPFTQFNGYIDQKQEALNKQIKSVNDSMDRHNYQMN
CCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
QKYQIYLTQFTAMEATINQFSAASGLFS
CEEEEEEEEHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MISGMSAAQFAQQLIGADRAGKDTLYKGKLTNSKTQLDAYTLLENNMKKMATKLSEIGGD
CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ATKGKIATVSGDNATATVKSDAPKGNYDLSVHKLAQAHQLTKTYASENELLPASGVISIQ
CCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VGSDPTKRMDIDLATINGGAAISVSQLRDVINKQVGNPGVQASLVRTGNQIEFMLSSKES
ECCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCC
GVANQVKVEFNGADWGMTERRAAQDAELTLNGIDITSSSNYLENVVDGVSLELVKVHAAG
CCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCEEEEEEEEECC
DSSMIKVADDFEANKKTVKDFVDSFNSLMTQINQLTRSMGVKASDSSSSDKDKEDKTTAV
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
SEAQIGVLKGDTSLRLLQSRLRDSVFTTASNGMRLSDIGIEIGRDGKLKIDDAKLTDSFK
HHCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCEEECCCHHCCHHC
SDPEKVQAMFTGEGSYVKNVEKTLKPFTQFNGYIDQKQEALNKQIKSVNDSMDRHNYQMN
CCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
QKYQIYLTQFTAMEATINQFSAASGLFS
CEEEEEEEEHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]