| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176141
Identifier: 126176141
GI number: 126176141
Start: 4646107
End: 4646433
Strand: Reverse
Name: 126176141
Synonym: Sbal_3953
Alternate gene names: NA
Gene position: 4646433-4646107 (Counterclockwise)
Preceding gene: 126176142
Following gene: 126176140
Centisome position: 90.62
GC content: 46.18
Gene sequence:
>327_bases ATGTCAGAGAAGGATGGGCAAATCTCAATTAAGCAATGGGCGCGTTTTGCGAGTGCTCTGCGCCAATATGCAGATGCTCA GGATTGGGAAAATGTCCGAAAAGTGAATATCGCTTTGATTAAGGCACTGCAACAGGCAGGTAAGGCTCATGATATTGAGC AGAAAACTGCCCGTGCGGAATTAAAGCGGGTTCATTCTCAAGTGCTACAAGAGTTGATCTTGGCTCGTGATGAATTAGCC GTTGAAATGAGCCGCTTTAAGTCGCAACAACCAGGTTTAGCCGCCTATCAATTAACTCAAGTGAGTGGAGCTGTGGATGA TCTCTGA
Upstream 100 bases:
>100_bases AGCTTACATCGTCTCTATGACTTCTGTAGCCGTCAGCTTGTCAGTGCCAGTGTCGAAAATAGTGCAGAAGCTCTGGTTCC AATTACTCAGGTGATTACTA
Downstream 100 bases:
>100_bases TCTTCTTTCAATTCGTCCAGTGGGCACAAATACCAGCTTGACGACTAAAGTGACAAGTGCAGTTGATCAAGATAAATCTG AGTCATTTACCTTGTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSEKDGQISIKQWARFASALRQYADAQDWENVRKVNIALIKALQQAGKAHDIEQKTARAELKRVHSQVLQELILARDELA VEMSRFKSQQPGLAAYQLTQVSGAVDDL
Sequences:
>Translated_108_residues MSEKDGQISIKQWARFASALRQYADAQDWENVRKVNIALIKALQQAGKAHDIEQKTARAELKRVHSQVLQELILARDELA VEMSRFKSQQPGLAAYQLTQVSGAVDDL >Mature_107_residues SEKDGQISIKQWARFASALRQYADAQDWENVRKVNIALIKALQQAGKAHDIEQKTARAELKRVHSQVLQELILARDELAV EMSRFKSQQPGLAAYQLTQVSGAVDDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12162; Mature: 12031
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKDGQISIKQWARFASALRQYADAQDWENVRKVNIALIKALQQAGKAHDIEQKTARAE CCCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LKRVHSQVLQELILARDELAVEMSRFKSQQPGLAAYQLTQVSGAVDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SEKDGQISIKQWARFASALRQYADAQDWENVRKVNIALIKALQQAGKAHDIEQKTARAE CCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LKRVHSQVLQELILARDELAVEMSRFKSQQPGLAAYQLTQVSGAVDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA