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The map label for this gene is rpfG [H]

Identifier: 126175978

GI number: 126175978

Start: 4444317

End: 4445906

Strand: Direct

Name: rpfG [H]

Synonym: Sbal_3786

Alternate gene names: 126175978

Gene position: 4444317-4445906 (Clockwise)

Preceding gene: 126175977

Following gene: 126175979

Centisome position: 86.68

GC content: 45.03

Gene sequence:

>1590_bases
ATGAGTGATTTTCTAGATGACTGGCTAACAGAAGATACCAACGAAAAAATACCCAACCAACGAGTTTGGAATGTATTAGT
GGTTGACGATGAACCCGATATTGTCAATGTCACAAAGTTAACACTAAGCAGCTTCACATATAAAAACAAGACGCTAAATG
TACAACATGCTTATTCGGCAGCTGAGGCCGCTGAAATTATAAGCAATACAACAGATCTCGCTCTTATCTTACTCGACGTG
GTAATGGAGACCGATGACGCTGGCCTCAAACTCGTCAAATGGATTAGAGACGAATTGGGTAATAACATGGTCCGTATCGT
GTTACGCACTGGCCAACCCGGTTATGCACCTGAAAAAAGCGTCATTATTGACTACGATATTAACGACTACAAATTAAAAA
CAGACTTAACAGCAGAGAAACTATTTACTGTCGTCATCGCCTCTCTGCGCGCATATGAGAGTCTTTGGTCACTAGAAGAA
AACCGCATTGGTCTGATGAAAATTCTGGAGGGCACATCAAGCCTTTACCGCATTGAGTCCCTAAAACAGTTTGCCTCCGG
CATACTTGATCAAATCAGCTTACTCCTAAAGCAAGCTCCCGAAGGCATTCTAGTGACAGCCAAAGGAATGCAGGCAAAAA
CACCAGATCGGCTAACGATTATCGCCGCCACGGGACTGTACGAATCATTTGAAGCCGATGACCAAGGTCTTATTAACCAA
CCAACGTTAACTCGCAACATAGCATTAGCCCACAAACATCAACAATCTGTTTTCCAGCATCCTCATGACGTGTTGCGAAT
ACCCTCACATAACGGACACACATTCTTTATATACTTCTCACCCATATATAAAATTGACACCGCAGAGCAAGCACTCCTTG
AAATATTCTGCGAGCGCATGTCAGCCGCCTACGACAACTTTCACTTATTCGGCCAGCTCAAAAAATCGCAGGAAGCCAGC
ATTGTCGCCATGGCAAGCCTAGCCGAACACAAAGACGAAGATACCGGTTGGCATGTTTTGCGTGTTCGTGATTTAACCGA
GGCGATTGCCAATGAACTATTGCAAACTGGCCACTTTACAGATGAGCTAACTCCGGGCTTCTTATCAAAAGTTGGCTGGG
CCAGTATTCTCCATGACATAGGCAAGATAGGTATTAAAGACTCCATCTTGCAGAAAAAAGGCAAGCTGGATAACGACGAA
CGTAGCATCATGGAAACACATGCCCATATCGGCGAAGATATTTTATTTAACGCGTCAAAATTGATTCAAGGCAGAAACTA
TTTCTCCATCGCTGCCCAAATTGCCGGCGGCCACCATGAATATTTTGACGGCCACGGCTACCCAAGAGGCTTGTCTGGGG
ATCACATTCCACTCTGCGCACGCATTGTTGCTGTCGTCGATGTTTTTGACGCCCTACTGAGCGATCGCCCATACAAAACT
GCTTGGCCACTTAATCAGGCAATTGATTATATCATTGCCCGCAGCAGTACCCAGTTTGATCCCCGTATGGTGCAAGCGCT
TTTGACCCTACTAAAAGAAAAGAGACTCTCCCCAGAACTGTGCGAATACTATGGCCTTAACACACAGTGA

Upstream 100 bases:

>100_bases
TACCTTGTTGAATAAGCTTTCTCCGACTATCCTGAACGGAGTCAAGCTTATGGCTAGTGTCAGGTCAGGCTAACCTAATT
TAGCTCACGGGGTTTTCGAT

Downstream 100 bases:

>100_bases
TGGAGAATAGGCGATGAAAAAAAACCATGCTCAGGGTATATTATATGCCGCATTATCGGCAGCTTTTTTATTGATCCTCG
CCATGTCCACAACGTTTTTC

Product: response regulator receiver modulated metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSDFLDDWLTEDTNEKIPNQRVWNVLVVDDEPDIVNVTKLTLSSFTYKNKTLNVQHAYSAAEAAEIISNTTDLALILLDV
VMETDDAGLKLVKWIRDELGNNMVRIVLRTGQPGYAPEKSVIIDYDINDYKLKTDLTAEKLFTVVIASLRAYESLWSLEE
NRIGLMKILEGTSSLYRIESLKQFASGILDQISLLLKQAPEGILVTAKGMQAKTPDRLTIIAATGLYESFEADDQGLINQ
PTLTRNIALAHKHQQSVFQHPHDVLRIPSHNGHTFFIYFSPIYKIDTAEQALLEIFCERMSAAYDNFHLFGQLKKSQEAS
IVAMASLAEHKDEDTGWHVLRVRDLTEAIANELLQTGHFTDELTPGFLSKVGWASILHDIGKIGIKDSILQKKGKLDNDE
RSIMETHAHIGEDILFNASKLIQGRNYFSIAAQIAGGHHEYFDGHGYPRGLSGDHIPLCARIVAVVDVFDALLSDRPYKT
AWPLNQAIDYIIARSSTQFDPRMVQALLTLLKEKRLSPELCEYYGLNTQ

Sequences:

>Translated_529_residues
MSDFLDDWLTEDTNEKIPNQRVWNVLVVDDEPDIVNVTKLTLSSFTYKNKTLNVQHAYSAAEAAEIISNTTDLALILLDV
VMETDDAGLKLVKWIRDELGNNMVRIVLRTGQPGYAPEKSVIIDYDINDYKLKTDLTAEKLFTVVIASLRAYESLWSLEE
NRIGLMKILEGTSSLYRIESLKQFASGILDQISLLLKQAPEGILVTAKGMQAKTPDRLTIIAATGLYESFEADDQGLINQ
PTLTRNIALAHKHQQSVFQHPHDVLRIPSHNGHTFFIYFSPIYKIDTAEQALLEIFCERMSAAYDNFHLFGQLKKSQEAS
IVAMASLAEHKDEDTGWHVLRVRDLTEAIANELLQTGHFTDELTPGFLSKVGWASILHDIGKIGIKDSILQKKGKLDNDE
RSIMETHAHIGEDILFNASKLIQGRNYFSIAAQIAGGHHEYFDGHGYPRGLSGDHIPLCARIVAVVDVFDALLSDRPYKT
AWPLNQAIDYIIARSSTQFDPRMVQALLTLLKEKRLSPELCEYYGLNTQ
>Mature_528_residues
SDFLDDWLTEDTNEKIPNQRVWNVLVVDDEPDIVNVTKLTLSSFTYKNKTLNVQHAYSAAEAAEIISNTTDLALILLDVV
METDDAGLKLVKWIRDELGNNMVRIVLRTGQPGYAPEKSVIIDYDINDYKLKTDLTAEKLFTVVIASLRAYESLWSLEEN
RIGLMKILEGTSSLYRIESLKQFASGILDQISLLLKQAPEGILVTAKGMQAKTPDRLTIIAATGLYESFEADDQGLINQP
TLTRNIALAHKHQQSVFQHPHDVLRIPSHNGHTFFIYFSPIYKIDTAEQALLEIFCERMSAAYDNFHLFGQLKKSQEASI
VAMASLAEHKDEDTGWHVLRVRDLTEAIANELLQTGHFTDELTPGFLSKVGWASILHDIGKIGIKDSILQKKGKLDNDER
SIMETHAHIGEDILFNASKLIQGRNYFSIAAQIAGGHHEYFDGHGYPRGLSGDHIPLCARIVAVVDVFDALLSDRPYKTA
WPLNQAIDYIIARSSTQFDPRMVQALLTLLKEKRLSPELCEYYGLNTQ

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 59487; Mature: 59356

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFLDDWLTEDTNEKIPNQRVWNVLVVDDEPDIVNVTKLTLSSFTYKNKTLNVQHAYSA
CCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHEECCCEEEHHHHHHH
AEAAEIISNTTDLALILLDVVMETDDAGLKLVKWIRDELGNNMVRIVLRTGQPGYAPEKS
HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
VIIDYDINDYKLKTDLTAEKLFTVVIASLRAYESLWSLEENRIGLMKILEGTSSLYRIES
EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
LKQFASGILDQISLLLKQAPEGILVTAKGMQAKTPDRLTIIAATGLYESFEADDQGLINQ
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCC
PTLTRNIALAHKHQQSVFQHPHDVLRIPSHNGHTFFIYFSPIYKIDTAEQALLEIFCERM
CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHH
SAAYDNFHLFGQLKKSQEASIVAMASLAEHKDEDTGWHVLRVRDLTEAIANELLQTGHFT
HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
DELTPGFLSKVGWASILHDIGKIGIKDSILQKKGKLDNDERSIMETHAHIGEDILFNASK
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCHHH
LIQGRNYFSIAAQIAGGHHEYFDGHGYPRGLSGDHIPLCARIVAVVDVFDALLSDRPYKT
HHCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
AWPLNQAIDYIIARSSTQFDPRMVQALLTLLKEKRLSPELCEYYGLNTQ
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
>Mature Secondary Structure 
SDFLDDWLTEDTNEKIPNQRVWNVLVVDDEPDIVNVTKLTLSSFTYKNKTLNVQHAYSA
CHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHEECCCEEEHHHHHHH
AEAAEIISNTTDLALILLDVVMETDDAGLKLVKWIRDELGNNMVRIVLRTGQPGYAPEKS
HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
VIIDYDINDYKLKTDLTAEKLFTVVIASLRAYESLWSLEENRIGLMKILEGTSSLYRIES
EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
LKQFASGILDQISLLLKQAPEGILVTAKGMQAKTPDRLTIIAATGLYESFEADDQGLINQ
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCC
PTLTRNIALAHKHQQSVFQHPHDVLRIPSHNGHTFFIYFSPIYKIDTAEQALLEIFCERM
CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHH
SAAYDNFHLFGQLKKSQEASIVAMASLAEHKDEDTGWHVLRVRDLTEAIANELLQTGHFT
HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
DELTPGFLSKVGWASILHDIGKIGIKDSILQKKGKLDNDERSIMETHAHIGEDILFNASK
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCHHH
LIQGRNYFSIAAQIAGGHHEYFDGHGYPRGLSGDHIPLCARIVAVVDVFDALLSDRPYKT
HHCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
AWPLNQAIDYIIARSSTQFDPRMVQALLTLLKEKRLSPELCEYYGLNTQ
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]