| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is purC [H]
Identifier: 126175977
GI number: 126175977
Start: 4442693
End: 4443796
Strand: Direct
Name: purC [H]
Synonym: Sbal_3785
Alternate gene names: 126175977
Gene position: 4442693-4443796 (Clockwise)
Preceding gene: 126175976
Following gene: 126175978
Centisome position: 86.65
GC content: 49.64
Gene sequence:
>1104_bases ATGAGTCTTGCTGATTCCGTACTTGCCATCAATAACGATTTGCCTATCCGCACCGACAGCCCAGTCCACAGCGGCAAGGT TCGCAGCGTTTACTGGCTAACCGACGCCGACAGTCGCCGTTTAATTACCACTAAAGGTTATAACGTCCCCGAAGATACCC CGCTCGCCATCATGGTGATCAGCGACCGTATCTCGGCCTTCGACTGTATCTTCCACGGTGAAGGCGGCCTCAAAGGCATT CCCGGTAAAGGCGCGGCATTAAACGCGATATCTAACCATTGGTTTAAACTGTTCGCCGAAAACGGCCTAGCCGACAGCCA TATTTTGGATATCCCGCACCCGTTCGTATGGATAGTCCAAAAAGCTCGCCCTATTAAAGTCGAAGCCATTTGTCGCCAGT ACATCACAGGCTCAATGTGGCGCGCTTACTCAAAAGGCGAGCGAGTATTCTGTGGCATTACACTGCCAGAAGGCTTAGAG AAAGCTCAAAAGCTCCCTGAGCTGTTAATCACTCCATCGACTAAGGGTATTTTAACCGGCATCCCAGGCGTGCCCGCCCA AGATGACGTGAACATCAGCCGCAGCGACATCGAAGCCAACTACCAAGCCTTTGGTTTTGAAAAGCTTTCAGATATTGACC TGTACGAGAAGCTGTTAAAAGATGGCTTTAAAGTGATTTCAAAAGCACTGGCCGACATTGACCAAGTGTTTGTCGACACT AAGTTTGAGTTCGGTTATGTGACTGACAAAGATGGCAACTCAAAACTGATTTACATGGATGAAGTCGGTACTCCAGACTC ATCACGTATTTGGGACGGCGCCGCCTACCGCGATGGCAAGATTTTAGAAAACTCTAAAGAGGGTTTCCGCCAGTTCCTGC TGAATCATTTCCCCGATCCTGATGTGCTGCTTAACAAAGACAGAATGCCAGAGCGTGAAGCCCTAGCCCGCGATAATGAC CTGCCACTTGAGGCCATGATGCAAGTGTCACGCACCTACACCGGCGTTGCCGAGAAGGTGACTGGCGCTCCAATCCCGCT GCCAGCGAATCCAAAGGCAGATATTATTAAGATACTCAAAGATGAGTATGATCTGATTGTGTAA
Upstream 100 bases:
>100_bases GTTGCAATGAATCTGGCTGTTGCTAACGCCATAGTCCATCTGCAAACCGACACTTATAAAAACCTTATCCCTACACTCTC TATCCTAAGGAATACTCGTC
Downstream 100 bases:
>100_bases TAGAGAGTTGTAATCAGATCTGAGGTTTTGAGTAGTTTACCCATAGCTGAATAGTAGAAAAGGCGCTTAGGCGCCTTTTT GTTTACTTCGAAACTGTGTT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGI PGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLE KAQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEKLSDIDLYEKLLKDGFKVISKALADIDQVFVDT KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDND LPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILKDEYDLIV
Sequences:
>Translated_367_residues MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGI PGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLE KAQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEKLSDIDLYEKLLKDGFKVISKALADIDQVFVDT KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDND LPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILKDEYDLIV >Mature_366_residues SLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGIP GKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEK AQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEKLSDIDLYEKLLKDGFKVISKALADIDQVFVDTK FEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDNDL PLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILKDEYDLIV
Specific function: Unknown
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=298, Percent_Identity=31.8791946308725, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR014106 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 40786; Mature: 40655
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS01057 SAICAR_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVI CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEE SDRISAFDCIFHGEGGLKGIPGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQ CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEE KARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEKAQKLPELLITPSTKGILTG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCEEECCCCCCEEEC IPGVPAQDDVNISRSDIEANYQAFGFEKLSDIDLYEKLLKDGFKVISKALADIDQVFVDT CCCCCCCCCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDP CEEECEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DVLLNKDRMPEREALARDNDLPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILK CEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DEYDLIV HHCCCCC >Mature Secondary Structure SLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVI CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEE SDRISAFDCIFHGEGGLKGIPGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQ CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEE KARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEKAQKLPELLITPSTKGILTG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCEEECCCCCCEEEC IPGVPAQDDVNISRSDIEANYQAFGFEKLSDIDLYEKLLKDGFKVISKALADIDQVFVDT CCCCCCCCCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDP CEEECEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DVLLNKDRMPEREALARDNDLPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILK CEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DEYDLIV HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA