| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is torS [C]
Identifier: 126175979
GI number: 126175979
Start: 4445920
End: 4447602
Strand: Direct
Name: torS [C]
Synonym: Sbal_3787
Alternate gene names: 126175979
Gene position: 4445920-4447602 (Clockwise)
Preceding gene: 126175978
Following gene: 126175980
Centisome position: 86.71
GC content: 47.0
Gene sequence:
>1683_bases ATGAAAAAAAACCATGCTCAGGGTATATTATATGCCGCATTATCGGCAGCTTTTTTATTGATCCTCGCCATGTCCACAAC GTTTTTCTTATACATGGAGTCTAGGCAAGCCATTGATAAGGCCCAGCTCAATCGTGAGCAAACACTTCAATTGGCAGATG AGCTACGGCAAACGTCAGACGACCTTACGCGAATGGTTCGCACATACGTGGTCACAGGCAACACAATGTATAAGCAACAG TTTCAAGAAGTGCTCGACATTCGTGACGGACTTGCACCTCGCCCTGAAAATTACCCTTATATATATTGGGACTTAGTGCT TGAACCGGATAAAAGGCCACGTCCAGCAAGCACATCGGTAAAATTAACCGATTTAATGCGTCAAGCCAACGTCACCAATG AAGAACTTCATCTGCTCAGCAGCGCTAAAGAAAACTCGGACACCCTTGTTAATCTCGAGCGCCAAGCAATGGCCCTCCGA GAGCGTGCCGAACCTCATGACCTAAAAACACACTTGCAAGCCATTGACTTGGTCCACTCAAAAGCGTACCAAGAAGCCAA AGTCGGCATAATGTTACCTATTTTAAATTTCACCAAAGTGCTGGATGAGCGCACGCAACTTAGCGTGCAACGTCATCGTC AAACTGCAGCCAGACTACAACATACACTTACCGTATTAGCCTTTTTATTGGTACTGACCATCGCTTTAACTGCATGGGTA GTACATCGAATCCTCGGCGCCTCGCTGAGCACCTTGGAACAACACATATCCAGCCTCAGCAACGGCACCTGCACGGAATC GCTTATCGTACCGCGAGGGTTAGAAACCAGTATTGCAGGCTGTATTTCACGCGCACAAAAACGTCTCATCGAGCTGGATA TTGAACGCACACAACAACAAACCGAACTCAAAAAGGCAGAGCATTCTTTAATGGAGTCAGAACGGTTGTCCTCTCTGGGC GCATTAGTTGCAGGCGTTGCCCACGAGCTGAATACCCCAATCGGCATTGCCGTAACGGCGGCCTCTGCACTAGAGGCAAA TACCAAAGATATAGCGGCCCAGATTAAAGACGGCAAGATGCTTCGCTCAACTTTTGACAATTACATTGAGAACTGCATCG AAACTGCACCTATGGTTTTACGTGCCTGCCAACGCGCGGCGAACCTCATCGCTAGCTTCAAAAATATATCCATAGACCAA ACTTCCGAACAACGCCGATTGTTTATGCTACACGACGTCGCCAACGACCATATCACCATGTTACGTACAGCCCATAAGCA TGTGAAATGGACCTTCGAAAACACAATAAGCCCTGAAATTAGTTGCGATAGTTACCCAGGAGCACTTGGGCAAGTGATCT CAAATCTACTAAACAATGCAGCTATCCATGCTTTCACCCCAACCGACAGCGGCACTATCACCATCAGTGCTGAAACCGAA AACGAGGATGTGATTATTTATGTCACCGATAACGGAAAGGGCATGAGTGAAGCCATTTTGGCCCGCATCTGGCAGCCTTT TTTCACCACAAAATTTGGCACTGGAGGATCTGGGCTTGGGCTTGCTATCTGCCATAATATTGCCGTGGGTATACTGAAAG GTTCGCTGAAGGCAACCTCGACAGAAGGTCAAGGCACATGCTTCACCTTACGCATTCCATTGTTTTTCAATGGAAAAATT TAG
Upstream 100 bases:
>100_bases CGTATGGTGCAAGCGCTTTTGACCCTACTAAAAGAAAAGAGACTCTCCCCAGAACTGTGCGAATACTATGGCCTTAACAC ACAGTGATGGAGAATAGGCG
Downstream 100 bases:
>100_bases GATAGATACAGGTCACGCCGATAAATTGGTCTGGTAAAACAATACCAGCCAGCAATGTTTATGCACAAAGTGCAAACATC TCAACATAGGCAATATACCC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MKKNHAQGILYAALSAAFLLILAMSTTFFLYMESRQAIDKAQLNREQTLQLADELRQTSDDLTRMVRTYVVTGNTMYKQQ FQEVLDIRDGLAPRPENYPYIYWDLVLEPDKRPRPASTSVKLTDLMRQANVTNEELHLLSSAKENSDTLVNLERQAMALR ERAEPHDLKTHLQAIDLVHSKAYQEAKVGIMLPILNFTKVLDERTQLSVQRHRQTAARLQHTLTVLAFLLVLTIALTAWV VHRILGASLSTLEQHISSLSNGTCTESLIVPRGLETSIAGCISRAQKRLIELDIERTQQQTELKKAEHSLMESERLSSLG ALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIENCIETAPMVLRACQRAANLIASFKNISIDQ TSEQRRLFMLHDVANDHITMLRTAHKHVKWTFENTISPEISCDSYPGALGQVISNLLNNAAIHAFTPTDSGTITISAETE NEDVIIYVTDNGKGMSEAILARIWQPFFTTKFGTGGSGLGLAICHNIAVGILKGSLKATSTEGQGTCFTLRIPLFFNGKI
Sequences:
>Translated_560_residues MKKNHAQGILYAALSAAFLLILAMSTTFFLYMESRQAIDKAQLNREQTLQLADELRQTSDDLTRMVRTYVVTGNTMYKQQ FQEVLDIRDGLAPRPENYPYIYWDLVLEPDKRPRPASTSVKLTDLMRQANVTNEELHLLSSAKENSDTLVNLERQAMALR ERAEPHDLKTHLQAIDLVHSKAYQEAKVGIMLPILNFTKVLDERTQLSVQRHRQTAARLQHTLTVLAFLLVLTIALTAWV VHRILGASLSTLEQHISSLSNGTCTESLIVPRGLETSIAGCISRAQKRLIELDIERTQQQTELKKAEHSLMESERLSSLG ALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIENCIETAPMVLRACQRAANLIASFKNISIDQ TSEQRRLFMLHDVANDHITMLRTAHKHVKWTFENTISPEISCDSYPGALGQVISNLLNNAAIHAFTPTDSGTITISAETE NEDVIIYVTDNGKGMSEAILARIWQPFFTTKFGTGGSGLGLAICHNIAVGILKGSLKATSTEGQGTCFTLRIPLFFNGKI >Mature_560_residues MKKNHAQGILYAALSAAFLLILAMSTTFFLYMESRQAIDKAQLNREQTLQLADELRQTSDDLTRMVRTYVVTGNTMYKQQ FQEVLDIRDGLAPRPENYPYIYWDLVLEPDKRPRPASTSVKLTDLMRQANVTNEELHLLSSAKENSDTLVNLERQAMALR ERAEPHDLKTHLQAIDLVHSKAYQEAKVGIMLPILNFTKVLDERTQLSVQRHRQTAARLQHTLTVLAFLLVLTIALTAWV VHRILGASLSTLEQHISSLSNGTCTESLIVPRGLETSIAGCISRAQKRLIELDIERTQQQTELKKAEHSLMESERLSSLG ALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKMLRSTFDNYIENCIETAPMVLRACQRAANLIASFKNISIDQ TSEQRRLFMLHDVANDHITMLRTAHKHVKWTFENTISPEISCDSYPGALGQVISNLLNNAAIHAFTPTDSGTITISAETE NEDVIIYVTDNGKGMSEAILARIWQPFFTTKFGTGGSGLGLAICHNIAVGILKGSLKATSTEGQGTCFTLRIPLFFNGKI
Specific function: Member Of The Two-Component Regulatory System Tors/Torr Involved In The Anaerobic Utilization Of Trimethylamine-N-Oxide (Tmao). Detects The Presence Of Tmao In The Medium And, In Response, Activates Torr Via A Four-Step Phosphorelay. When Tmao Is Removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=385, Percent_Identity=27.012987012987, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1790436, Length=268, Percent_Identity=32.8358208955224, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI145693157, Length=268, Percent_Identity=29.8507462686567, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788549, Length=266, Percent_Identity=28.1954887218045, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790861, Length=266, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62124; Mature: 62124
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNHAQGILYAALSAAFLLILAMSTTFFLYMESRQAIDKAQLNREQTLQLADELRQTSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHH DLTRMVRTYVVTGNTMYKQQFQEVLDIRDGLAPRPENYPYIYWDLVLEPDKRPRPASTSV HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCH KLTDLMRQANVTNEELHLLSSAKENSDTLVNLERQAMALRERAEPHDLKTHLQAIDLVHS HHHHHHHHCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KAYQEAKVGIMLPILNFTKVLDERTQLSVQRHRQTAARLQHTLTVLAFLLVLTIALTAWV HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHRILGASLSTLEQHISSLSNGTCTESLIVPRGLETSIAGCISRAQKRLIELDIERTQQQ HHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TELKKAEHSLMESERLSSLGALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHCCCHH LRSTFDNYIENCIETAPMVLRACQRAANLIASFKNISIDQTSEQRRLFMLHDVANDHITM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEHHCCCHHHH LRTAHKHVKWTFENTISPEISCDSYPGALGQVISNLLNNAAIHAFTPTDSGTITISAETE HHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECC NEDVIIYVTDNGKGMSEAILARIWQPFFTTKFGTGGSGLGLAICHNIAVGILKGSLKATS CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEECC TEGQGTCFTLRIPLFFNGKI CCCCCEEEEEEEEEEECCCC >Mature Secondary Structure MKKNHAQGILYAALSAAFLLILAMSTTFFLYMESRQAIDKAQLNREQTLQLADELRQTSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHH DLTRMVRTYVVTGNTMYKQQFQEVLDIRDGLAPRPENYPYIYWDLVLEPDKRPRPASTSV HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCH KLTDLMRQANVTNEELHLLSSAKENSDTLVNLERQAMALRERAEPHDLKTHLQAIDLVHS HHHHHHHHCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KAYQEAKVGIMLPILNFTKVLDERTQLSVQRHRQTAARLQHTLTVLAFLLVLTIALTAWV HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHRILGASLSTLEQHISSLSNGTCTESLIVPRGLETSIAGCISRAQKRLIELDIERTQQQ HHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TELKKAEHSLMESERLSSLGALVAGVAHELNTPIGIAVTAASALEANTKDIAAQIKDGKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHCCCHH LRSTFDNYIENCIETAPMVLRACQRAANLIASFKNISIDQTSEQRRLFMLHDVANDHITM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEHHCCCHHHH LRTAHKHVKWTFENTISPEISCDSYPGALGQVISNLLNNAAIHAFTPTDSGTITISAETE HHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECC NEDVIIYVTDNGKGMSEAILARIWQPFFTTKFGTGGSGLGLAICHNIAVGILKGSLKATS CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEECC TEGQGTCFTLRIPLFFNGKI CCCCCEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]