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The map label for this gene is frdC [H]

Identifier: 126175943

GI number: 126175943

Start: 4399150

End: 4399875

Strand: Direct

Name: frdC [H]

Synonym: Sbal_3749

Alternate gene names: 126175943

Gene position: 4399150-4399875 (Clockwise)

Preceding gene: 126175942

Following gene: 126175944

Centisome position: 85.8

GC content: 44.49

Gene sequence:

>726_bases
ATGTCAGCGAAAACGCGTGTTTCTACCGCCATTAACGGCGGACCATTTGGCCAAGCCTGGTCGGCTAAAGCAGACTGCTT
ACAAAGTGCGACAGGGCTTATATTGGGTATTTTCCTGTTATTTCATATGCATTTCGAGGCGAGCATTTTATTTGGTAAAG
AAACCTTCTTTCACATGGTGCAATTCTTAGAAGGCAGTATGTTTAGCTCGACGGGTCATGGCTTCCCCATAGTGACCAAG
ATCATTTCAGTCATTATGCTGGTGATTGTTGCAGTACATGCCGCCACCGCACTACGTCGTTTTCCAGTGCAATTAGGCCA
ATGGCGAGCGATGCGTGGCTTCATGTCGAGTATCAAGCATAGAGATACCCAAGCATGGTTTTGGCAGATGATTACCGGGT
TCTTACTGTTTTTCTTAGTGTCAGCCCATCTTGCCACTATGATTTTAAACCCTGATATTGGCCCTCACCTTTCGGCCGAA
CGGGTTTACCACGATAACGCTTGGCTCTTATATGTGGTGTTTTTACCTATCGTGTTATTCCACGGCATCGTTGGTTTATA
CCGAGTGATATTAAAGTGGGGTGTGAGTAGTAACCGCCCACTTATCCGCACTATAGCGCAAGTATTGATCGTCTATTTAT
TGTGTTTAGGCACATTAAGCCTAGTGACCTATATCAATATTGGTATCGAATTAGTTCTACCAGTACAACCGTTTATTCCT
CAGTAA

Upstream 100 bases:

>100_bases
AATTGGATTAACCCTCTTCTTTTAATCTGGATCTAAAGACTTTGTGTTGGCGTGATGCAGGTACATTCACGCCACAACAA
ACCTGGTAAGAGGTGAATTA

Downstream 100 bases:

>100_bases
TGGGCATGACGCTATCGGCGCACTTAGCCTGTATAGCAAGACAAACAACATACGGATCCTCCTCTGATACATAGTTGCCG
CGCATCTATGCCCGAGGAGT

Product: fumarate reductase cytochrome b-556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSAKTRVSTAINGGPFGQAWSAKADCLQSATGLILGIFLLFHMHFEASILFGKETFFHMVQFLEGSMFSSTGHGFPIVTK
IISVIMLVIVAVHAATALRRFPVQLGQWRAMRGFMSSIKHRDTQAWFWQMITGFLLFFLVSAHLATMILNPDIGPHLSAE
RVYHDNAWLLYVVFLPIVLFHGIVGLYRVILKWGVSSNRPLIRTIAQVLIVYLLCLGTLSLVTYINIGIELVLPVQPFIP
Q

Sequences:

>Translated_241_residues
MSAKTRVSTAINGGPFGQAWSAKADCLQSATGLILGIFLLFHMHFEASILFGKETFFHMVQFLEGSMFSSTGHGFPIVTK
IISVIMLVIVAVHAATALRRFPVQLGQWRAMRGFMSSIKHRDTQAWFWQMITGFLLFFLVSAHLATMILNPDIGPHLSAE
RVYHDNAWLLYVVFLPIVLFHGIVGLYRVILKWGVSSNRPLIRTIAQVLIVYLLCLGTLSLVTYINIGIELVLPVQPFIP
Q
>Mature_240_residues
SAKTRVSTAINGGPFGQAWSAKADCLQSATGLILGIFLLFHMHFEASILFGKETFFHMVQFLEGSMFSSTGHGFPIVTKI
ISVIMLVIVAVHAATALRRFPVQLGQWRAMRGFMSSIKHRDTQAWFWQMITGFLLFFLVSAHLATMILNPDIGPHLSAER
VYHDNAWLLYVVFLPIVLFHGIVGLYRVILKWGVSSNRPLIRTIAQVLIVYLLCLGTLSLVTYINIGIELVLPVQPFIPQ

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 26973; Mature: 26841

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
SAKTRVSTAINGGPFGQAWSAKADCLQSATGLILGIFLLFHMHFEASILFGKETFFHMV
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
QFLEGSMFSSTGHGFPIVTKIISVIMLVIVAVHAATALRRFPVQLGQWRAMRGFMSSIKH
HHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTQAWFWQMITGFLLFFLVSAHLATMILNPDIGPHLSAERVYHDNAWLLYVVFLPIVLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHH
HGIVGLYRVILKWGVSSNRPLIRTIAQVLIVYLLCLGTLSLVTYINIGIELVLPVQPFIP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]