| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175748
Identifier: 126175748
GI number: 126175748
Start: 4173794
End: 4174999
Strand: Reverse
Name: 126175748
Synonym: Sbal_3552
Alternate gene names: NA
Gene position: 4174999-4173794 (Counterclockwise)
Preceding gene: 126175749
Following gene: 126175739
Centisome position: 81.43
GC content: 38.81
Gene sequence:
>1206_bases ATGAATCGACTACTTGAACATAAATTAGAGTTAACTAAAAAGAAAAAACAACAAAATTCTGGTTTTTTATCACCTGAAAA ACACCTTTGGGCATTAAATCCTTGGTGGCAAACATTCTTGTGGATATCCGCTCTTTCTTGGGGGGCAACAGCATCATTGC TTGCAAATGAGATCATGTCTTTTTCTTGGCCGCTCCCTTCTAACTGGAACCTTCACCCCAATTATTACACGATCATATTT TTCTTAACGGCTTTTGTTCTGATATTTGGTTTTGCTCTCAGCAGTTGGGTAGCTAGAGCGCAAGATAGTGTTGTTATTGA ATCAATGCTTACAATGCCACCACACGATTTCTGGTCAAGTTACGGAGAAAATTTTTCAATCGCGTCACAGATGGTGGATA AAAGATCAACGGCAATGTTCGACGGACTTGTAGAACTCAAAAATTCACCTAATGAGCTAGACTCTCTTCGCGAAGATTTA GAGAAAGATGCGAGAACAATTTTAGACTCGATTATTAACCTCGTTAAAAAGTGGGATTCTTCAAACCTTCGAGGCAGTTC CGTAATTTACCGTGCGAATTTAATGAAAGTATATTATTTCGGTGACGGTGAGGATTGTATAGCGCCAGATTCGGAAATTG CTAAGCAGCTAAATGAGCATGGGAAACGTTTCACCCAGCAGCCCGCTAGTAGTCACTACTCAGGCTTTGTGGTGTTAGAA AACAATATCTATACAACAACAACAGAAACAAGTTCTCCCGACCCTGATGTTGATAGAAAAGCGATTGCGTTTCCATTTAC AGACTTGGCCAACAATTTAGAATACCCTATTTATTCAAATCTTGTTGGTGCGCCTAAAGCAGTTGTATCGCGAAGTGCAT CGTATGTGCCTGATGTAAAGAATATTATTGATGATTATGTAAAAAATAGCTCTGTGGTTGATATGAAGATACTCGAACAG CTTGAAGAGTATTACTCCGATACTTCTGTCGCTCATTCGATTCTCTCAATCCCTGTTCGTAATAGCGATACATTGAAGGT TTCATTTGTATTAAATATCTATAGAAATCAAAACGGCCTTTTGTTTGATGGTAGCAAAGTAAAAGACTTCGTTGAGATTA TTCGACCTTTCATCACAACCTTGGCTCGACTTTTGGAAACTGGTGAACTGTTCGATCAACTAAGAAGCCAACAGGAAAAG CAATAA
Upstream 100 bases:
>100_bases CATGTAATTTATAGTAATTTCAGAGTGATGTGTTCGTGAAAAAAAGATAATATCTAATGTCATCAATTGCACATTAGATG CTTTCTTATCTCATCAGCCT
Downstream 100 bases:
>100_bases TTGTTCTATGATTAACCATAGAGTTAGAATACAATGAAGCTCTAGACAGGGGGAAGCCAGTATGACACAAACACAAAAAG CGGTTTTCAAGAAGGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNRLLEHKLELTKKKKQQNSGFLSPEKHLWALNPWWQTFLWISALSWGATASLLANEIMSFSWPLPSNWNLHPNYYTIIF FLTAFVLIFGFALSSWVARAQDSVVIESMLTMPPHDFWSSYGENFSIASQMVDKRSTAMFDGLVELKNSPNELDSLREDL EKDARTILDSIINLVKKWDSSNLRGSSVIYRANLMKVYYFGDGEDCIAPDSEIAKQLNEHGKRFTQQPASSHYSGFVVLE NNIYTTTTETSSPDPDVDRKAIAFPFTDLANNLEYPIYSNLVGAPKAVVSRSASYVPDVKNIIDDYVKNSSVVDMKILEQ LEEYYSDTSVAHSILSIPVRNSDTLKVSFVLNIYRNQNGLLFDGSKVKDFVEIIRPFITTLARLLETGELFDQLRSQQEK Q
Sequences:
>Translated_401_residues MNRLLEHKLELTKKKKQQNSGFLSPEKHLWALNPWWQTFLWISALSWGATASLLANEIMSFSWPLPSNWNLHPNYYTIIF FLTAFVLIFGFALSSWVARAQDSVVIESMLTMPPHDFWSSYGENFSIASQMVDKRSTAMFDGLVELKNSPNELDSLREDL EKDARTILDSIINLVKKWDSSNLRGSSVIYRANLMKVYYFGDGEDCIAPDSEIAKQLNEHGKRFTQQPASSHYSGFVVLE NNIYTTTTETSSPDPDVDRKAIAFPFTDLANNLEYPIYSNLVGAPKAVVSRSASYVPDVKNIIDDYVKNSSVVDMKILEQ LEEYYSDTSVAHSILSIPVRNSDTLKVSFVLNIYRNQNGLLFDGSKVKDFVEIIRPFITTLARLLETGELFDQLRSQQEK Q >Mature_401_residues MNRLLEHKLELTKKKKQQNSGFLSPEKHLWALNPWWQTFLWISALSWGATASLLANEIMSFSWPLPSNWNLHPNYYTIIF FLTAFVLIFGFALSSWVARAQDSVVIESMLTMPPHDFWSSYGENFSIASQMVDKRSTAMFDGLVELKNSPNELDSLREDL EKDARTILDSIINLVKKWDSSNLRGSSVIYRANLMKVYYFGDGEDCIAPDSEIAKQLNEHGKRFTQQPASSHYSGFVVLE NNIYTTTTETSSPDPDVDRKAIAFPFTDLANNLEYPIYSNLVGAPKAVVSRSASYVPDVKNIIDDYVKNSSVVDMKILEQ LEEYYSDTSVAHSILSIPVRNSDTLKVSFVLNIYRNQNGLLFDGSKVKDFVEIIRPFITTLARLLETGELFDQLRSQQEK Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45694; Mature: 45694
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLLEHKLELTKKKKQQNSGFLSPEKHLWALNPWWQTFLWISALSWGATASLLANEIMS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHH FSWPLPSNWNLHPNYYTIIFFLTAFVLIFGFALSSWVARAQDSVVIESMLTMPPHDFWSS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YGENFSIASQMVDKRSTAMFDGLVELKNSPNELDSLREDLEKDARTILDSIINLVKKWDS HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNLRGSSVIYRANLMKVYYFGDGEDCIAPDSEIAKQLNEHGKRFTQQPASSHYSGFVVLE CCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE NNIYTTTTETSSPDPDVDRKAIAFPFTDLANNLEYPIYSNLVGAPKAVVSRSASYVPDVK CCEEEEECCCCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHCCCCHHHHHCCCCCCCHHH NIIDDYVKNSSVVDMKILEQLEEYYSDTSVAHSILSIPVRNSDTLKVSFVLNIYRNQNGL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC LFDGSKVKDFVEIIRPFITTLARLLETGELFDQLRSQQEKQ EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRLLEHKLELTKKKKQQNSGFLSPEKHLWALNPWWQTFLWISALSWGATASLLANEIMS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHH FSWPLPSNWNLHPNYYTIIFFLTAFVLIFGFALSSWVARAQDSVVIESMLTMPPHDFWSS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YGENFSIASQMVDKRSTAMFDGLVELKNSPNELDSLREDLEKDARTILDSIINLVKKWDS HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNLRGSSVIYRANLMKVYYFGDGEDCIAPDSEIAKQLNEHGKRFTQQPASSHYSGFVVLE CCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE NNIYTTTTETSSPDPDVDRKAIAFPFTDLANNLEYPIYSNLVGAPKAVVSRSASYVPDVK CCEEEEECCCCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHCCCCHHHHHCCCCCCCHHH NIIDDYVKNSSVVDMKILEQLEEYYSDTSVAHSILSIPVRNSDTLKVSFVLNIYRNQNGL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC LFDGSKVKDFVEIIRPFITTLARLLETGELFDQLRSQQEKQ EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA