| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175739
Identifier: 126175739
GI number: 126175739
Start: 4166023
End: 4166268
Strand: Reverse
Name: 126175739
Synonym: Sbal_3542
Alternate gene names: NA
Gene position: 4166268-4166023 (Counterclockwise)
Preceding gene: 126175748
Following gene: 126175734
Centisome position: 81.26
GC content: 46.75
Gene sequence:
>246_bases ATGAAAACATTAGCGACTGAATTTGGTCATGCGATGCGCAAAATGAGAAAGCTCAGAGGCTTATCTCAAGATGAATTGGC GTTACGTGCAGAGATTGACCGCAGTTATATCGGCCGTATAGAGCGAGCGGAGGCGAACATCACCCTCGATATGTTGTACA AGATTGCAGAGGTGCTCGACTGTGAGCCACATGAGTTGCTGCCGAGTCGAGCATCACTAAAAGGTCAGGTGTTACCTAAA TCTTAA
Upstream 100 bases:
>100_bases GGGTTTAAATGAGGATTATATGCACTAAATGCGGATTATAATCCGTGGTTGGTTGGTGAGCAAATTCCCATAGTGGTTGC CTTGTGACGAAGGAGACACT
Downstream 100 bases:
>100_bases ATACAGCCTCGCTGTTTGTAGCTGGCTTGCCACTCTTTAAACAGCTCAGTCAGTCTTGCTTCATTCTGCTTACCACCAGA CGCTCTTTTGGCTTTTACTT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: DNA Methyltransferase; RtrR Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Restriction-
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MKTLATEFGHAMRKMRKLRGLSQDELALRAEIDRSYIGRIERAEANITLDMLYKIAEVLDCEPHELLPSRASLKGQVLPK S
Sequences:
>Translated_81_residues MKTLATEFGHAMRKMRKLRGLSQDELALRAEIDRSYIGRIERAEANITLDMLYKIAEVLDCEPHELLPSRASLKGQVLPK S >Mature_81_residues MKTLATEFGHAMRKMRKLRGLSQDELALRAEIDRSYIGRIERAEANITLDMLYKIAEVLDCEPHELLPSRASLKGQVLPK S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9225; Mature: 9225
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLATEFGHAMRKMRKLRGLSQDELALRAEIDRSYIGRIERAEANITLDMLYKIAEVLD CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHC CEPHELLPSRASLKGQVLPKS CCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKTLATEFGHAMRKMRKLRGLSQDELALRAEIDRSYIGRIERAEANITLDMLYKIAEVLD CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHC CEPHELLPSRASLKGQVLPKS CCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA