| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is cysI [H]
Identifier: 126175612
GI number: 126175612
Start: 4001706
End: 4003403
Strand: Reverse
Name: cysI [H]
Synonym: Sbal_3415
Alternate gene names: 126175612
Gene position: 4003403-4001706 (Counterclockwise)
Preceding gene: 126175613
Following gene: 126175611
Centisome position: 78.08
GC content: 48.53
Gene sequence:
>1698_bases ATGAGTGAGCAAAAGTTAGCGTTAAACGAATACCTAAAGACCGACAGTGATTACCTGCGCGGTACGATTAAAGAAGGCTT AGATTCTGCGGTAACCGGCAGTTTCAGTGACGGCGATCAGCAGTTGATCAAATTCCATGGCTTCTATCAGCAAGATGATC GCGATTTACGTAACGAACGTAAAGAGCAAAAACTTGAGCCTCTATATAGCTTTATGTTGCGTGCCCGTGTACCTGGCGGT ATTTGTTCACCGCAGCAATGGTTAGGTGTAGACAAAATTGCGTCTACCTTAACCAGCTCAAACAGCATTCGTTTAACGAC CCGTCAAACCTTCCAATACCACGGTATTCCTAAGCGTAACTTGAAGACCATTATTCAAGACTTAGATCGTGAAGCGCTGG ATTCGATTGCTGCTTGTGGTGACGTTAACCGAAACGTGATGTGTAACCCCAATCCGGTGGAATCGAAACTGCACGAGCAA GCCTATGCGGTGGCGAAACAACTGTCAGATCATCTGCTGCCACACACGCGTGCTTATGCCGAAATTTGGTTAGACGAAGA AAAGTTACTCTCAACCGAAGATGAAACCGTTGAACCTGTATATGGCAAAACTTATCTGCCACGTAAGTTCAAAATGGCGG TTGCGGTTCCTCCCGATAACGATGTTGACGTTTACACTAACGATTTAGGCTTTATCGCCGTTGCTGAAAACGGTGAGTTG GTTGGCTTTAACTTAACGGCGGGCGGCGGCATGGGCTCGACCCATGGCGAGGTGGAGACTTTCCCACGTCTGGCTGACGA CTTTGGTTTTATCAAAACTGAAGACGTGATGAAGTTTGCCGAAGCTGTCATGACAGTGCAACGCGACTGGGGTAATCGTG TTAACCGTAAACGTTCACGTCTTAAATATACTATCGTCGACCATGGCTATGAGAAATTTAAAGCCGAAGTCGAATTGCGT GCAGGAGTGAAGTTTGAACCTAAGCGTGATGTAGTGATTGGCGATCGCGGCGATCGTTATGGTTGGGTTGAAGGTGTTGA CGGTAAATGGCATTTAACCTTATTTATCGAAAGCGGCCGCATTAAAGATTTACCGGGTCAAACCCTGCAAACGGGACTGC GTGAAATAGCTAAGATCCACAAAGGCGATTTCCGCATGACCTCGAATCAAAACATGATCATCGCAGGTGTCGCGGCAGAA GATAAAGCCACGATTGAAGGCTTAGCCCGCAAACACGGACTACTGGGCCAAGTATTGACGCAAACCCGCGGTCACTCGAT TGCCTGTGTGGCCTTGCCGACGTGTCCATTAGCAATGGCGGAAGCTGAGCGTTACTTCCCTGAGTTTATCGATCACATCG ATGCGCTGCAGGCAAAACATGGCATCAGCGAGCAAGCGATTGTAGTGCGGATGACAGGTTGTCCAAACGGTTGCGCACGT CCATTTGCCGCTGAAATTGGCCTTGTGGGTAAAGCACCAGGTCGTTACAACTTGTACTTAGGCGCAAGCTTTGAAGGGAC TCGTCTGAACAAGATGCACAGAGAAAATATCCAAGAGGCGGAAATTCTCGCCGAATTGGATACCCTGTTTGGCCGCTACG CCGTCGAGCGTGATGCAGGCGAAACCTTTGGTAACTTCACCGTCCGCGTGGGTGTTGTGAAGGCGGTGATTGATGCCGCT AAGGATTTTCATGGTTGA
Upstream 100 bases:
>100_bases ATCTCAACCGTTACGCATATAAGAAACGCATAAGAATAGCCAAAGCTGCACACGTGATGACCTGTGCAGTCAGCGAACCG AATTTGAAGAGGCAGTTGCC
Downstream 100 bases:
>100_bases TCATCAACAAAAAACCAGTGATACAGTGCCGACTGTGGTCAGCACGGCAGAGTTAACGGCGCTATTGAGTGCGCCCAAGG CCGAGCAAGCGATAGAGCTT
Product: sulfite reductase subunit beta
Products: NA
Alternate protein names: SiR-HP; SiRHP [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSEQKLALNEYLKTDSDYLRGTIKEGLDSAVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGG ICSPQQWLGVDKIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHEQ AYAVAKQLSDHLLPHTRAYAEIWLDEEKLLSTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGEL VGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRVNRKRSRLKYTIVDHGYEKFKAEVELR AGVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAE DKATIEGLARKHGLLGQVLTQTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISEQAIVVRMTGCPNGCAR PFAAEIGLVGKAPGRYNLYLGASFEGTRLNKMHRENIQEAEILAELDTLFGRYAVERDAGETFGNFTVRVGVVKAVIDAA KDFHG
Sequences:
>Translated_565_residues MSEQKLALNEYLKTDSDYLRGTIKEGLDSAVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGG ICSPQQWLGVDKIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHEQ AYAVAKQLSDHLLPHTRAYAEIWLDEEKLLSTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGEL VGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRVNRKRSRLKYTIVDHGYEKFKAEVELR AGVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAE DKATIEGLARKHGLLGQVLTQTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISEQAIVVRMTGCPNGCAR PFAAEIGLVGKAPGRYNLYLGASFEGTRLNKMHRENIQEAEILAELDTLFGRYAVERDAGETFGNFTVRVGVVKAVIDAA KDFHG >Mature_564_residues SEQKLALNEYLKTDSDYLRGTIKEGLDSAVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGI CSPQQWLGVDKIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHEQA YAVAKQLSDHLLPHTRAYAEIWLDEEKLLSTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGELV GFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRVNRKRSRLKYTIVDHGYEKFKAEVELRA GVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAED KATIEGLARKHGLLGQVLTQTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISEQAIVVRMTGCPNGCARP FAAEIGLVGKAPGRYNLYLGASFEGTRLNKMHRENIQEAEILAELDTLFGRYAVERDAGETFGNFTVRVGVVKAVIDAAK DFHG
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate [H]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Escherichia coli, GI1789122, Length=561, Percent_Identity=57.9322638146168, Blast_Score=690, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6322597, Length=593, Percent_Identity=43.8448566610455, Blast_Score=525, Evalue=1e-150,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011786 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 63022; Mature: 62891
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQKLALNEYLKTDSDYLRGTIKEGLDSAVTGSFSDGDQQLIKFHGFYQQDDRDLRNER CCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH KEQKLEPLYSFMLRARVPGGICSPQQWLGVDKIASTLTSSNSIRLTTRQTFQYHGIPKRN HHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEEEEEECCCCHHH LKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHEQAYAVAKQLSDHLLPHTRAYA HHHHHHHHCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EIWLDEEKLLSTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGEL HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCE VGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRVNRKRSR EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKYTIVDHGYEKFKAEVELRAGVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGR EEEEEECCCHHHHHEEEEEECCCEECCCCCEEECCCCCCCCCEECCCCEEEEEEEEECCC IKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAEDKATIEGLARKHGLLGQVLT CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH QTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISEQAIVVRMTGCPNGCAR HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PFAAEIGLVGKAPGRYNLYLGASFEGTRLNKMHRENIQEAEILAELDTLFGRYAVERDAG CHHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC ETFGNFTVRVGVVKAVIDAAKDFHG CCCCCEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure SEQKLALNEYLKTDSDYLRGTIKEGLDSAVTGSFSDGDQQLIKFHGFYQQDDRDLRNER CCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH KEQKLEPLYSFMLRARVPGGICSPQQWLGVDKIASTLTSSNSIRLTTRQTFQYHGIPKRN HHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEEEEEECCCCHHH LKTIIQDLDREALDSIAACGDVNRNVMCNPNPVESKLHEQAYAVAKQLSDHLLPHTRAYA HHHHHHHHCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EIWLDEEKLLSTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGEL HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCE VGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRVNRKRSR EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKYTIVDHGYEKFKAEVELRAGVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGR EEEEEECCCHHHHHEEEEEECCCEECCCCCEEECCCCCCCCCEECCCCEEEEEEEEECCC IKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAEDKATIEGLARKHGLLGQVLT CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH QTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISEQAIVVRMTGCPNGCAR HCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PFAAEIGLVGKAPGRYNLYLGASFEGTRLNKMHRENIQEAEILAELDTLFGRYAVERDAG CHHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC ETFGNFTVRVGVVKAVIDAAKDFHG CCCCCEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA