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The map label for this gene is nrdR

Identifier: 126175362

GI number: 126175362

Start: 3700047

End: 3700496

Strand: Reverse

Name: nrdR

Synonym: Sbal_3161

Alternate gene names: 126175362

Gene position: 3700496-3700047 (Counterclockwise)

Preceding gene: 126175363

Following gene: 126175361

Centisome position: 72.17

GC content: 49.33

Gene sequence:

>450_bases
ATGCATTGTCCATTTTGCAGCGCGACAGATACTAAAGTCATCGATTCTCGATTAGTGGCGGAAGGCCATCAAGTGCGCCG
TCGCCGAGAATGTACCGAATGCCATGAAAGATTTACCACCTTCGAAGGCGCCGAGTTAGTCATGCCTAGGGTGATTAAAC
GTGATGGTTCACGCCAACCCTTCGATGAAGAAAAACTCCAAGGTGGCATGCTGCGCGCGGTTGAAAAACGCCCCGTGTCT
ATGGATGAAATCGAGCAAGCGCTTAGCAAAATCAAATCTACCCTACGCGCCACTGGCGAGCGGGAAGTGCCCTCAGAAAT
GGTCGGTAACTTGATGATGGAGCAATTGATGAGTCTCGATAAAGTCGCCTACATACGTTTTGCTTCTGTGTACCGCGCCT
TTGAAGATGTGTCTGAATTTGGTGAAGCCATCGCTAAACTGCAAAAGTAG

Upstream 100 bases:

>100_bases
TTTTATTGGTAAAATCTTAGGCTTAAATCCATTGCGTTTAGCTGAGATTTAACAGGTAAAGCCATTAACGCTTTACTCGC
ATTCACTGGCAGGAGGCTCA

Downstream 100 bases:

>100_bases
TTATTCGATTTTTGTGGCCTGTCGTTCAGTCTTCTGGTTGCGCTAGCTTTAAAAGAGGCTTTTGATTAATAGCTTCTGCA
AGACAGGTTTTAAACACAGA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHCPFCSATDTKVIDSRLVAEGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGSRQPFDEEKLQGGMLRAVEKRPVS
MDEIEQALSKIKSTLRATGEREVPSEMVGNLMMEQLMSLDKVAYIRFASVYRAFEDVSEFGEAIAKLQK

Sequences:

>Translated_149_residues
MHCPFCSATDTKVIDSRLVAEGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGSRQPFDEEKLQGGMLRAVEKRPVS
MDEIEQALSKIKSTLRATGEREVPSEMVGNLMMEQLMSLDKVAYIRFASVYRAFEDVSEFGEAIAKLQK
>Mature_149_residues
MHCPFCSATDTKVIDSRLVAEGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGSRQPFDEEKLQGGMLRAVEKRPVS
MDEIEQALSKIKSTLRATGEREVPSEMVGNLMMEQLMSLDKVAYIRFASVYRAFEDVSEFGEAIAKLQK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=148, Percent_Identity=73.6486486486486, Blast_Score=232, Evalue=6e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_SHEB2 (B8E6W2)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357146.1
- GeneID:   7087982
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1210
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 17060; Mature: 17060

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPFCSATDTKVIDSRLVAEGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGSRQP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
FDEEKLQGGMLRAVEKRPVSMDEIEQALSKIKSTLRATGEREVPSEMVGNLMMEQLMSLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KVAYIRFASVYRAFEDVSEFGEAIAKLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHCPFCSATDTKVIDSRLVAEGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGSRQP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
FDEEKLQGGMLRAVEKRPVSMDEIEQALSKIKSTLRATGEREVPSEMVGNLMMEQLMSLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KVAYIRFASVYRAFEDVSEFGEAIAKLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA