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The map label for this gene is samB [H]

Identifier: 126174566

GI number: 126174566

Start: 2739135

End: 2740409

Strand: Direct

Name: samB [H]

Synonym: Sbal_2353

Alternate gene names: 126174566

Gene position: 2739135-2740409 (Clockwise)

Preceding gene: 126174565

Following gene: 126174568

Centisome position: 53.42

GC content: 49.18

Gene sequence:

>1275_bases
ATGACGCCCTCACTATTCGCACTCGTCGATTGCAATAATTTTTATGCCTCCTGTGAGCGGATGTTTAGGCCAGATTTAGC
TGGCAGGCCGATTGTAGTGTTATCCAATAACGATGGCTGCGTCGTCGCCCGCTCGGCAGAGGCAAAACAACTTGGCATCA
AGATGGCGGTGCCTGTGTATCAAATCGCAAACCAACTCCGCCAGCATCACGTCGCGGTATTCTCCTCCAACTATGCACTC
TATGCCGACATATCAAATAGAGTCATGACCACCTTAGAACAAATGGTGCCGAAAGTAGAAGTGTATAGTATTGATGAAGC
GTTTTTAGACCTTTCTCGTCTCGATAAATGCATTGATATTCATCAGCTTGCACTTGATATTTATCAACGAATACCACAGT
GGATTGGGATCAGTGTTTGCGTCGGCATTGGACCGACAAAAACCCTCGCTAAACTGGCAAACCATGCCGCGAAACGTTAT
CCCGCGACGCAGGGCGTGGTTGACTTGCGCGACCGTGAACGCCAACGACGGCTGATGGCGCTTATCCCTGTCGACGAAGT
CTGGGGAATAGGCCGTAGGCTTACAAAACGCTTGAACATCATGGGCATAAATACCGCGTTGCAATTGGCGGATGCGCATC
CAAAGCTTATCCGCGACACCTTTTCTGTCACCGTTGAGCGCACGGTACGCGAACTTAACGGCATTGCCTGTGATGACATA
CAAGAGGTCGCCGCCACTAAGCAACAAATTATTAGCTCCCGCTCCTTTGGCAGTCGTATTGATAATTTAGAAGCGATGCA
ACAGGCAATCAATGAATACACTTTTAGGGCCTGTGAAAAACTGCGCTCCGAGCGCCAGTACGCTAAAGCGATGTCAGTAT
TTGTGCGTACTAGCCCTTTTAGCGATACAACTCCCCAGTACAGCAAATCACTGTCGGGCAGTTTAGTTCGCCCCAGCAAT
GATACGCGTGATTTTGTCACCCTTGGCCAAAGCCTACTGCAACGCATTTGGCGTGAAGGTCATGCCTATGCAAAGGCCGG
TGTCATGTTAGGGGATTTTTTTGGTGCAGGCGTGTTTCAGCTCGGATTATTCGATGACGTCACGCCTAGGCCTAAAAGCA
AGGAGTTGATGCAATTACTCGATAAAGTGAACCACAGCGGTCATGGAAAAATTTGGTTTGCAGGACAAGGTATTGACCCG
ACTTGGGGAATGAAGCGAGAGCAGCTTTCCCCTCGCTACACCACCCAATGGGCACAATTGCCCATAGTGAAATAA

Upstream 100 bases:

>100_bases
AATTACTGCCACGTAATGCCTTATTCTCCCCGATTGCCATCAATGATGAGTCTGAGTTAAACATCTTTGGGGTGGTGACC
AACGTGGTGAAAAAGCTCAA

Downstream 100 bases:

>100_bases
TCAACAGATCCAATGGCTAAATGACCGCCTGCGAATTACAGACCCCACCTAACTCTAAACTAACTCTAAAATCCATATAG
CACTAAAACCCATCTAGATC

Product: DNA-directed DNA polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHVAVFSSNYAL
YADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIHQLALDIYQRIPQWIGISVCVGIGPTKTLAKLANHAAKRY
PATQGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDTTPQYSKSLSGSLVRPSN
DTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDP
TWGMKREQLSPRYTTQWAQLPIVK

Sequences:

>Translated_424_residues
MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHVAVFSSNYAL
YADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIHQLALDIYQRIPQWIGISVCVGIGPTKTLAKLANHAAKRY
PATQGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDTTPQYSKSLSGSLVRPSN
DTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDP
TWGMKREQLSPRYTTQWAQLPIVK
>Mature_423_residues
TPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHVAVFSSNYALY
ADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIHQLALDIYQRIPQWIGISVCVGIGPTKTLAKLANHAAKRYP
ATQGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDIQ
EVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDTTPQYSKSLSGSLVRPSND
TRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDPT
WGMKREQLSPRYTTQWAQLPIVK

Specific function: Involved in UV protection and mutation [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 umuC domain [H]

Homologues:

Organism=Escherichia coli, GI1787432, Length=422, Percent_Identity=55.4502369668246, Blast_Score=470, Evalue=1e-134,
Organism=Escherichia coli, GI1786425, Length=200, Percent_Identity=25.5, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017961
- InterPro:   IPR001126
- InterPro:   IPR017963 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 47712; Mature: 47580

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVY
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHCCCCCCCHHH
QIANQLRQHHVAVFSSNYALYADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDI
HHHHHHHHHHHHEEECCEEEEEEHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
HQLALDIYQRIPQWIGISVCVGIGPTKTLAKLANHAAKRYPATQGVVDLRDRERQRRLMA
HHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
CCCHHHHHHHHHHHHHHHHEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDTTPQYSKSLSGSLVRPSNDTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQ
CCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHE
LGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDPTWGMKREQLSPRYTTQWAQL
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCHHCHHHHC
PIVK
CCCC
>Mature Secondary Structure 
TPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVY
CCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHCCCCCCCHHH
QIANQLRQHHVAVFSSNYALYADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDI
HHHHHHHHHHHHEEECCEEEEEEHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
HQLALDIYQRIPQWIGISVCVGIGPTKTLAKLANHAAKRYPATQGVVDLRDRERQRRLMA
HHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
CCCHHHHHHHHHHHHHHHHEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDTTPQYSKSLSGSLVRPSNDTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQ
CCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHE
LGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDPTWGMKREQLSPRYTTQWAQL
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCHHCHHHHC
PIVK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1991707 [H]