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The map label for this gene is tnpA [H]

Identifier: 126174304

GI number: 126174304

Start: 2416786

End: 2418108

Strand: Reverse

Name: tnpA [H]

Synonym: Sbal_2083

Alternate gene names: 126174304

Gene position: 2418108-2416786 (Counterclockwise)

Preceding gene: 126174306

Following gene: 126174303

Centisome position: 47.16

GC content: 49.51

Gene sequence:

>1323_bases
ATGCCACGGCGACAGATACTAAGCAGTGAAGAACAGAAGCGCTTACTGGTTATACCAGATGATGAAATTATTCTGACCCG
AATGTGTTTTTTGAATGAGCGTGATATTGCGCTCATAAATAAGCACAGACGGCCAGCGAATCGCCTGGGCTTTGCCGTTT
TACTCTGCTATCTGCGTGGCTCCGGATTTATTCCGGACAAAAATACCTCGCCTCACTGTGGCGTCGTATCCAGAGTCGCT
TCCCGATTGAAACTTCAGCCTGATTTATGGCATGAATATGCATCCAGAGAGCAAACTCGCTGGGAACATCTGACCGAACT
TTATCGTTACCTGAAATTATCCCCATTCAGCCGAACACTGCAAAAAGACTGCATCCGGCATCTGCACCCCTATGCCATGC
GAACTGACAAAGGGTTTATGTTGGCGGAAGAAATGCTCAGCTGGCTACATAACAATAATGTTATTTTCCCTTCTGTTGAT
GTGATCGAGCGGACGATTGCCGAAATCGTCACGCTGTCTGACAGAGCCGTATTTTCGGCACTTACCGCGCAACTGGAAAA
TCATCATAAATCAGCACTCGACAGCCTGCTCATATCAGAGAGTGACCAACCTTCCCGTCTGGCGTGGTTACTTCAGCCAT
CGGGTAAAATCAACGGTAAAAATGTGCTGCAACATATCGACCGGCTTAATTCCATTACTGCGCTGGGATTGCCTGATGGT
ATTGCGCTTTCCGTTCACCAGAACAGGTTGCTTAAGCTAGCGCGTGAGGGACGAAAAATGAGCAGCAGAGATCTGGCAAA
ATTCACCGATGTCAGACGTTACGCTACGATGATTTGTATAATAACAGAGGCCCGGGCCACCCTAACAGACGAAGTGATTG
ATCTACACGAGCGTATTCTGGGCAGTCTGTTCAGCAGGGCAAAACGAACGCAGTCCGAACGACTCCAGCAAACGGGAAAG
CTTATTCAGAGCAAGCTAAAGCAGTACGTTACCGTCGGTCAGGCGTTACTTAACGCCAGAGAATCCGGCGAAGATCCCTG
GACCGCAATAGAAGACGTCCTTCCATGGCAGGAATTCATCAACAGTGTGGAGGAAACGCGGGTTCTGTCCCGTAAGGGCA
ATTTCGACCCACTTCACCTGATCACCGAAAAATACAGCACGCTGCGTAAATACGCCCCGCGTATGCTGTCAGCATTGCAG
TTCACGGCGGCGCCTGCAGCTCAGATGCTCAGCGATGCACTGGACACCATAACTGAAATGTACCGTAAGCAACTTCGTCA
AGTTCCGCCGGCAGCGCCAACAGGATTTATCCCTGAAAGCTGA

Upstream 100 bases:

>100_bases
ACTAATATTCGTACATATTTAGAATAGGGTGTCCAAAACCGGTCAGTTTCGGTCAAAGTTAACCACTAACAAATTGAAAC
TATACGCGAGGGAAGCATTT

Downstream 100 bases:

>100_bases
CGAAAACTGGTGCTCACACCATCCGGGATCGACCGCAAATACTACGAGTTTTGCGTACTGAATGAACTCAAAGGGGCGTT
ACGTTCCGGTGATATCTGGG

Product: transposase Tn3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MPRRQILSSEEQKRLLVIPDDEIILTRMCFLNERDIALINKHRRPANRLGFAVLLCYLRGSGFIPDKNTSPHCGVVSRVA
SRLKLQPDLWHEYASREQTRWEHLTELYRYLKLSPFSRTLQKDCIRHLHPYAMRTDKGFMLAEEMLSWLHNNNVIFPSVD
VIERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDG
IALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERILGSLFSRAKRTQSERLQQTGK
LIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQ
FTAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPES

Sequences:

>Translated_440_residues
MPRRQILSSEEQKRLLVIPDDEIILTRMCFLNERDIALINKHRRPANRLGFAVLLCYLRGSGFIPDKNTSPHCGVVSRVA
SRLKLQPDLWHEYASREQTRWEHLTELYRYLKLSPFSRTLQKDCIRHLHPYAMRTDKGFMLAEEMLSWLHNNNVIFPSVD
VIERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDG
IALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERILGSLFSRAKRTQSERLQQTGK
LIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQ
FTAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPES
>Mature_439_residues
PRRQILSSEEQKRLLVIPDDEIILTRMCFLNERDIALINKHRRPANRLGFAVLLCYLRGSGFIPDKNTSPHCGVVSRVAS
RLKLQPDLWHEYASREQTRWEHLTELYRYLKLSPFSRTLQKDCIRHLHPYAMRTDKGFMLAEEMLSWLHNNNVIFPSVDV
IERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDGI
ALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERILGSLFSRAKRTQSERLQQTGKL
IQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQF
TAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPES

Specific function: Required for transposition of transposon Tn2501 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 50339; Mature: 50208

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRQILSSEEQKRLLVIPDDEIILTRMCFLNERDIALINKHRRPANRLGFAVLLCYLRG
CCCHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHC
SGFIPDKNTSPHCGVVSRVASRLKLQPDLWHEYASREQTRWEHLTELYRYLKLSPFSRTL
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QKDCIRHLHPYAMRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSA
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
LTAQLENHHKSALDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEECCCCC
IALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERIL
CEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLFSRAKRTQSERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH
NSVEETRVLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
YRKQLRQVPPAAPTGFIPES
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PRRQILSSEEQKRLLVIPDDEIILTRMCFLNERDIALINKHRRPANRLGFAVLLCYLRG
CCHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHC
SGFIPDKNTSPHCGVVSRVASRLKLQPDLWHEYASREQTRWEHLTELYRYLKLSPFSRTL
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QKDCIRHLHPYAMRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSA
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
LTAQLENHHKSALDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEECCCCC
IALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERIL
CEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLFSRAKRTQSERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH
NSVEETRVLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
YRKQLRQVPPAAPTGFIPES
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2827105; 3027041 [H]