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The map label for this gene is tnpA [H]

Identifier: 126174303

GI number: 126174303

Start: 2415124

End: 2416776

Strand: Reverse

Name: tnpA [H]

Synonym: Sbal_2082

Alternate gene names: 126174303

Gene position: 2416776-2415124 (Counterclockwise)

Preceding gene: 126174304

Following gene: 126174300

Centisome position: 47.13

GC content: 48.82

Gene sequence:

>1653_bases
GTGCTCACACCATCCGGGATCGACCGCAAATACTACGAGTTTTGCGTACTGAATGAACTCAAAGGGGCGTTACGTTCCGG
TGATATCTGGGTAAAAGGATCACGTCGCTACAGAAATTTTGATGATTATCTCATCACGGCTGCTGAGTTTGAGAAATTCC
GCCATAATGATCAGTTACAGTTGGCCGTTCAGACCGATTGCCGGGCATACCTTCAGGCTCGTATGACCCTTCTTGCATCG
CGTCTGGAAGAAGTTAACGCGATGGCGCTTGCTGGTGATTTGCCCGATGTTGATATCTCAGATAAAGGCGTAAAAATAAC
CCCGTTGGAGAACAGCGTTCCTTCGGGTGTCTCGCCCTTTGCCGATTTGGTTTATGGCATGCTTCCCCATCCGAAAATTA
CGGAGATACTGGAAGAAGTGGATAACTGGACTGGGTTTACGCGTCACTTCACGCACCTCAAAAATAATAACGTCAGACCA
AAAGACGGAAGACCGTTGCTGACCACCATTTTGGCTGACGGCATCAATCTGGGGCTGACAAAAATGGCGGAGTCCTGCCC
GGGGGCAACAAAATCGACACTCGAAGGTATTCAGGCATGGTACATCAGAGATGAAACTTATTCAGCAGCACTTGTTGAGT
TGGTCAATGCCCAGAAAGCGCGCCCGCTAGCCGCATTCTGGGGTGATGGTACAACATCGTCGTCAGACGGACAGAACTTT
CGGGTAGGCAGTCACGGACGTTATGCCGGTCAGGTCAATCTTAAATATGGTCAAGAACCGGGCGTGCAGATTTATACGCA
TATCTCAGATCAATACAGTCCGTACTACGCCAAAGTGATCACTCGGGTGCGCGACTCAACTCACGTGCTTGATGGCCTTC
TGTACCATGAAAGCGACTTGGAAATTACCGAGCATTACACCGATACAGCAGGCTTTACAGAACATGTTTTTGCCCTGATG
CATCTGCTGGGATTCACTTTTGCGCCAAGGATCCGGGATCTTCATGACAAGCGGTTGTTTATTCAAGGAAATAACTGGGA
TTATCCGGGGCTTCAGTCCGTTATATCAACAACCCGCCTGAATCTCAAAGACATTGAGGCGCACTGGGATGAAGTATTAC
GGCTAGCAACTTCGATAAAGCAGGGGACAGTCACCGCATCGCTGATGATGAAAAAGTTAGCCAGTTATCCAAAACAGAAC
GGACTTGCCAAAGCGCTGAGAGAGATAGGTCGAATAGAGCGGACACTGTTTATGCTGGACTGGTTTCGAGATCCGGGTCT
GCGGCAACGGGTACAGGCTGGGCTGAATAAGGGTGAGGCCCGTAATGCCCTTGCGCGTGCGGTTTTTATGCATCGTCTGG
GTGAAATCAGAGATCGGGGGCTGGAAAATCAGAGTTACCGTGCCAGCGGACTGACGTTACTGACAGCGGCGATCACGTTA
TGGAACACGGTATATATAGAAAGAGCCATTGAGTCACTGAAACGAAAAGGTGTCCCTATTAATGAACAACTAGTTGCTCA
TCTTTCTCCCCTGGGCTGGGAACATATTAATCTGAGTGGCGATTACGTTTGGCGCCATAATGTAAAGCTGGGGTCCGGAA
AATATCGGCCATTACGTACAGTCAATACTGAATTGTACAAAAAACAGTCTTAG

Upstream 100 bases:

>100_bases
CGATGCACTGGACACCATAACTGAAATGTACCGTAAGCAACTTCGTCAAGTTCCGCCGGCAGCGCCAACAGGATTTATCC
CTGAAAGCTGACGAAAACTG

Downstream 100 bases:

>100_bases
CGTGGGATATTTTCCGTTTTCCAAGCGGACCCCTTAAACAGAAATATTGGCAAATACGTTGTGCTATAGAACCCAGCGTT
ACAGAATGCGGCGCAGTAAA

Product: transposase Tn3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLAS
RLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRP
KDGRPLLTTILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNF
RVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALM
HLLGFTFAPRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQN
GLAKALREIGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITL
WNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS

Sequences:

>Translated_550_residues
MLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLAS
RLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRP
KDGRPLLTTILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNF
RVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALM
HLLGFTFAPRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQN
GLAKALREIGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITL
WNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS
>Mature_550_residues
MLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLAS
RLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRP
KDGRPLLTTILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNF
RVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALM
HLLGFTFAPRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQN
GLAKALREIGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITL
WNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS

Specific function: Required for transposition of transposon Tn2501 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 62215; Mature: 62215

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEHHHHHHHCCCCCEE
LAVQTDCRAYLQARMTLLASRLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSGVSPF
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCCCCCHH
ADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLTTILADGINLGLT
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH
KMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNF
HHHHHCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCE
RVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDL
EECCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
EITEHYTDTAGFTEHVFALMHLLGFTFAPRIRDLHDKRLFIQGNNWDYPGLQSVISTTRL
CHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHCC
NLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERTLFMLD
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITL
HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECEEECCCCCCCHHH
VNTELYKKQS
HCHHHHCCCC
>Mature Secondary Structure
MLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEHHHHHHHCCCCCEE
LAVQTDCRAYLQARMTLLASRLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSGVSPF
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCCCCCHH
ADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLTTILADGINLGLT
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH
KMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNF
HHHHHCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCE
RVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDL
EECCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
EITEHYTDTAGFTEHVFALMHLLGFTFAPRIRDLHDKRLFIQGNNWDYPGLQSVISTTRL
CHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHCC
NLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERTLFMLD
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITL
HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECEEECCCCCCCHHH
VNTELYKKQS
HCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2827105; 3027041 [H]