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The map label for this gene is tolR [H]

Identifier: 126173973

GI number: 126173973

Start: 2029152

End: 2029586

Strand: Direct

Name: tolR [H]

Synonym: Sbal_1744

Alternate gene names: 126173973

Gene position: 2029152-2029586 (Clockwise)

Preceding gene: 126173972

Following gene: 126173974

Centisome position: 39.57

GC content: 49.66

Gene sequence:

>435_bases
ATGCAACCAGCTTATCAGCGCAAACGTCGTCGCCCCGTTGCCGAAATCAACGTGGTGCCCTATATCGACGTGATGCTCGT
GCTGTTAATTATTTTTATGGTAACAGCGCCCATAGTCACCCAAGGGGTAAAAGTGGAGCTGCCTCAAGGGGCTGCGGAAG
TTTTACCTGCTGACAGTAAGCCACCTGTGGTGGCTTCGATTGACGGTGATGGTGATTATTATCTGAATAAAGGCGGTTCA
ACTAACGTACCTATGGACTTGGAAGAACTGGCGACGGAAGTTGCTGCGCTTATGGTGACAGAGCCTGAGCGTCCAGTGGT
GGTTAAGGCCGATAGAAATATTCCTTACGATAAAGTGATTCAGTTGATGGTGACCTTGCAAGGTGCTGGCGTGCCATCAG
TCGGTTTGATGACGGATTCACCCAAGGAGAAATAG

Upstream 100 bases:

>100_bases
CGACTCAAGTCGATAAATTGGAAATGGCCTACGCAAACTTTATGGAAGAGTTCTCCAGCATTTTGCATCGCCAAGCATAC
AGTGAGAAGGAAGGGGCATA

Downstream 100 bases:

>100_bases
GTGGCAGATAAGTCAGATGTAACATTACCTCTGTCAATTTCAGCGGGTATTCATATTGGCGTGATAATTATTCTGGCGTT
GGGGATCGATTTCTCTCACA

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQPAYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVELPQGAAEVLPADSKPPVVASIDGDGDYYLNKGGS
TNVPMDLEELATEVAALMVTEPERPVVVKADRNIPYDKVIQLMVTLQGAGVPSVGLMTDSPKEK

Sequences:

>Translated_144_residues
MQPAYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVELPQGAAEVLPADSKPPVVASIDGDGDYYLNKGGS
TNVPMDLEELATEVAALMVTEPERPVVVKADRNIPYDKVIQLMVTLQGAGVPSVGLMTDSPKEK
>Mature_144_residues
MQPAYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVELPQGAAEVLPADSKPPVVASIDGDGDYYLNKGGS
TNVPMDLEELATEVAALMVTEPERPVVVKADRNIPYDKVIQLMVTLQGAGVPSVGLMTDSPKEK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=122, Percent_Identity=38.5245901639344, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1786959, Length=128, Percent_Identity=39.0625, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15598; Mature: 15598

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPAYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVELPQGAAEVLPADSK
CCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCC
PPVVASIDGDGDYYLNKGGSTNVPMDLEELATEVAALMVTEPERPVVVKADRNIPYDKVI
CCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHH
QLMVTLQGAGVPSVGLMTDSPKEK
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPAYQRKRRRPVAEINVVPYIDVMLVLLIIFMVTAPIVTQGVKVELPQGAAEVLPADSK
CCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCC
PPVVASIDGDGDYYLNKGGSTNVPMDLEELATEVAALMVTEPERPVVVKADRNIPYDKVI
CCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHH
QLMVTLQGAGVPSVGLMTDSPKEK
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]