| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is tolA [C]
Identifier: 126173974
GI number: 126173974
Start: 2029587
End: 2030615
Strand: Direct
Name: tolA [C]
Synonym: Sbal_1745
Alternate gene names: 126173974
Gene position: 2029587-2030615 (Clockwise)
Preceding gene: 126173973
Following gene: 126173975
Centisome position: 39.58
GC content: 47.23
Gene sequence:
>1029_bases GTGGCAGATAAGTCAGATGTAACATTACCTCTGTCAATTTCAGCGGGTATTCATATTGGCGTGATAATTATTCTGGCGTT GGGGATCGATTTCTCTCACAAACCTGAGCCTATGCAACAAGTTAGTGCGCCAGCGGTTAAAGCCGTGATGGTTGATCAGC AAAAAGTCGCTAATCAAGTTGAGAAACTTAAGCAAGAAAAGCGTGATGCCGAGCGCCGTGAGCAAGAACGTCAAGCTGAG CTTGAGCGCAAAGCGCAAGAAGCGAAGCAAGCGCGCGAACGTGAACAAGCTCAGATTAAACAGTTAGAGCAAGAACGTAA GCAGCAAGAAATTGAAACCCAAAAGGCCAATGAAGCGACCAAGCTAGCCCAAGTGAAACAGCAGCAGGAAAAGGAAAAGG CAGTTAAAGCCGAAGCCGACCGTAAGCTGAAAGAGCAGGAGCGTAAAGTCGCCGAAGATGCCGCGCAAAAAGCAGCAGAA AAACGCAAAGTGGAAGAAGCCGCTGCAGCGAAAGCGGAAAGTGACCGTAAGCTAAAGGAGGCAGAAGCTAAGGCCAAAGC TGAAAAAGCCAAGGCAGATGCAGATGCGAAAGCCGAAGCTAAAGCTAAAGCCAAAGCAGATGCTAAAGCTAAAGCGGATG CTAAGGCCAAAGCCGATGCTGAAGCCAAAGCCCGAGCTCAGCAGGAGCAAGAAATGGCTGATGCATTAGCGGCGGAGCAG GCGGCGTTGTCGCAAACCATGAATAAGCAGATGCAGAGTGAAGTGGGTAAGTATCAGGCAATGATTAAATCGACTATCCA ACGTAATTTGGTAGTGGATGAATCTATGCGTGGCAAGACTTGTACTGTCTCTGTACGATTAGCAAATGATGGTTTTGTGA TCAGCAGTCAAACTAAAGGCGGTGATCCTAACGTTTGTCGTGCAGCAAAAGCAGCGATTTTGAAGGCGGGTAAATTGCCA GTGTCTCCGGACCCTGCAGTTTATAACTTGATGAAAGAAATTAACTTAATCGTTGAACCAACGTTTTAA
Upstream 100 bases:
>100_bases AAATATTCCTTACGATAAAGTGATTCAGTTGATGGTGACCTTGCAAGGTGCTGGCGTGCCATCAGTCGGTTTGATGACGG ATTCACCCAAGGAGAAATAG
Downstream 100 bases:
>100_bases TTAAAGGAGTCCCATGAGAATATTGGCAAAATGGTTAGCATTGGCAGTTCTGCTGTGCACCACCCCCGCAAAAGCGGCAT TGGATATTGTGATCACAGAA
Product: TolA family protein
Products: NA
Alternate protein names: LA Protein; LA-Like Protein; Protein lA; And Transport-Associated Protein lA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MADKSDVTLPLSISAGIHIGVIIILALGIDFSHKPEPMQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERREQERQAE LERKAQEAKQAREREQAQIKQLEQERKQQEIETQKANEATKLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAE KRKVEEAAAAKAESDRKLKEAEAKAKAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQ AALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTKGGDPNVCRAAKAAILKAGKLP VSPDPAVYNLMKEINLIVEPTF
Sequences:
>Translated_342_residues MADKSDVTLPLSISAGIHIGVIIILALGIDFSHKPEPMQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERREQERQAE LERKAQEAKQAREREQAQIKQLEQERKQQEIETQKANEATKLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAE KRKVEEAAAAKAESDRKLKEAEAKAKAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQ AALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTKGGDPNVCRAAKAAILKAGKLP VSPDPAVYNLMKEINLIVEPTF >Mature_341_residues ADKSDVTLPLSISAGIHIGVIIILALGIDFSHKPEPMQQVSAPAVKAVMVDQQKVANQVEKLKQEKRDAERREQERQAEL ERKAQEAKQAREREQAQIKQLEQERKQQEIETQKANEATKLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEK RKVEEAAAAKAESDRKLKEAEAKAKAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQA ALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTKGGDPNVCRAAKAAILKAGKLPV SPDPAVYNLMKEINLIVEPTF
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. Also Involved In The Translocation Of Bacteriophage DNA. [C]
COG id: COG3064
COG function: function code M; Membrane protein involved in colicin uptake
Gene ontology:
Cell location: Type II Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37497; Mature: 37366
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSDVTLPLSISAGIHIGVIIILALGIDFSHKPEPMQQVSAPAVKAVMVDQQKVANQV CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLKQEKRDAERREQERQAELERKAQEAKQAREREQAQIKQLEQERKQQEIETQKANEAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAKAKAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHH AALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC GDPNVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPTF CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADKSDVTLPLSISAGIHIGVIIILALGIDFSHKPEPMQQVSAPAVKAVMVDQQKVANQV CCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLKQEKRDAERREQERQAELERKAQEAKQAREREQAQIKQLEQERKQQEIETQKANEAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAKAKAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHH AALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGKTCTVSVRLANDGFVISSQTKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC GDPNVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPTF CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA