| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fct [H]
Identifier: 126173958
GI number: 126173958
Start: 2009221
End: 2011470
Strand: Direct
Name: fct [H]
Synonym: Sbal_1729
Alternate gene names: 126173958
Gene position: 2009221-2011470 (Clockwise)
Preceding gene: 126173955
Following gene: 126173959
Centisome position: 39.19
GC content: 46.89
Gene sequence:
>2250_bases ATGGGATTAGACCAGAACAGACATTCTGTGAAGACTCGTTTCGCCTACTCATTAATTGCACTTGCACTCGCTCAACATCA GTCGGCATTCGCCGCTGAAACTGTACTCGATAAAGAGGCTCCACAGCAGACCTTGTCTACGAGCTCACCCGTTGCAAGTC CTGTATCGACTGAGCCTGCAGCCTATGAGCAAGTTAAGTTGGCAGCACCTGAGCGAATTGCCGTGCATGGCCGCGCGATG CAAATGTACGTCGATAAAGAAACGACGGTTGGCACTAAGACGGCGATTAATGTGATGGAATTGCCGCAGTCGGTGCAAGT GCTGACCGAGCAGTTAATTGTTGACCAAGCGGCGCGCAATATTACCGATTTATATCGCTCAATCGCGGGCGTGAGTGAGT TTAGTTATTCGGGCGTAACCTTTCGCGGTTTCCGTGACGATGCCAACGTCTTTTATGATGGGGTAAGGGGCGATCCCTAT TCGGGGTTTTCTGTGCCGCAACTGTTTAATGTGCAGCGGGTTGAAGTGTTAAAAGGCCCGGCATCGGCACTTTATGGCGG CGGTGAACCCGGCGGCATGATCAACTATGTCACTAAAAAACCAACTTTTGTTGAGAGTAAAGAGCTGACATTGAGCACTG GCAGCGAGGATATGATGGGTGGCTCGCTGGATTTCACCGGCGGCCTAACCCAAAATCTCGCCTATCGCTTTGGCGCCTAT TATCAGCAGGAAGATAGCTTTCGGAATAATGCCGATAGCCAAAATGCAGAAGTGGCGGGTGGGTTACTCTACGAAATCAG TGATGATACTAAGCTCACCACGACCTTCGATATTATTAAGCAGGATTTAGGCGGTAATCGGCTGCGCGGCGTGCCTGTCG ATAATGACGGTAACTTCCTTGTTGCGCCATCCTATAATGCCAATGAGAAGAGTGACTTCCAGAAGATGGATGCCGTGGTG CTGCAATCGATTCTCGATCATCAATTTAGCGATAATTTCTCGGTCAAGACTCAGATCCGTTATCTGAATAATGATTCCAC GCAGCAATATCATGAATCGAGAGGTTGGGCGACCTTAGATGCCAATAAAAAGCCCATTATGGGTGATGGCACCATAAAGC GTGAATACCGAGTGCAAGCTCGTGCCAACGATGAAATCAGTTTAACCAATGATTTTGTTTATGCATTCGATGCCTTAGGT TTTGAACATGAGTTCCTGTTTGGTGGCGATTATCACTATGTTGAAACCGAATACAGCTACAAGCTGGCGACGGATAAAAC GGGCGTCGGCAACCTGAATATTTTTGATCTTAATTATGGTGAAACTGACCCTAGTACTTACACGCTGCAAGACAAAGATA CCGATGGCACCCGCGCTAATCGCTATGGTGTATATGTGCAGGAACACTTGCACTTTAATGAACAGTGGTCATTGATTGCT GGTCTGCGTTTCAGCCAGTTTGATGACTATGATAAAAAGACCGGTTTCTCCTTCAGCGATAACGCGATAACGCCAAGAGC TGGGCTTAATTATCGTCCAATCGATTCAATGTCCTTTTATTTGAATTACTCAGAAAGCTTCAATCCAGCATCTTTAACCA ATCAAGCGGAAGATATTGGTGACGGTTTCCTCGATCCAGAAACGGGCAATCAAATTGAGCTTGGGATGAAAAATGAATGG CTTGATGGCCAGTTTATGACCACGCTCGCGGTATATCGCATTGAAAAACAAAATGTCGCCCAAGCTAACCCTTTAGATAC TGGCGATGACGATGGTATTCCAGCTTTGCTTAATTTGGGTGAAGTACACAGTCAAGGGGTTGAATGGACGCTGGTGGGGG ATTTAACCGATAACCTGACTGTTACGGCAAACTATGCCTATAACAAGACTGAAGTGGTTAAAGGGGTCACGAACGACAGT TTAACCAATACCTTCGACAGTAAGCACTTTGCCAATGCGCCGCGTCATCAAGCGGGGATATGGACCCGTTACGATATCAA TGCACTCGATTCGGCGATTGCCTTTGGTATGGATTATGTGGGCGAGCAGTTCAGCCTCGATGGTCAAATAGTGAAGCCCC ATACGATTTTTGACATGAGCTGGACGACTCAGTGGGAGCAAACTCAAGTTCGCTTAAATCTTAAAAATATCTTCGACAAA GAATATGCCGTCAGTGGGTTTAGCGAACGTAATGGCCATTTCCCCGGTGAGCCACGCAATATCACGCTTGAACTGAGTCA TAAGTTTTAA
Upstream 100 bases:
>100_bases CTTCATCTTTAAATGCCTGCGGATAACTCTTATGTGATTTCTTCAGACTCATATAGACCTCTTAATTTATTGACCATACT GTCTCAAAATTAAGTGTCCG
Downstream 100 bases:
>100_bases TGCATTGATGTGAAAACAGCTTGTTCGTTAAGGATGACGAACAAGCTAACCTGCCTAACCTTGCTCATCACTGCCGTTAT TTCTGCCAGTATTTGCTGTC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MGLDQNRHSVKTRFAYSLIALALAQHQSAFAAETVLDKEAPQQTLSTSSPVASPVSTEPAAYEQVKLAAPERIAVHGRAM QMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPY SGFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDFTGGLTQNLAYRFGAY YQQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDAVV LQSILDHQFSDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALG FEHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKDTDGTRANRYGVYVQEHLHFNEQWSLIA GLRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTNQAEDIGDGFLDPETGNQIELGMKNEW LDGQFMTTLAVYRIEKQNVAQANPLDTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNKTEVVKGVTNDS LTNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWEQTQVRLNLKNIFDK EYAVSGFSERNGHFPGEPRNITLELSHKF
Sequences:
>Translated_749_residues MGLDQNRHSVKTRFAYSLIALALAQHQSAFAAETVLDKEAPQQTLSTSSPVASPVSTEPAAYEQVKLAAPERIAVHGRAM QMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPY SGFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDFTGGLTQNLAYRFGAY YQQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDAVV LQSILDHQFSDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALG FEHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKDTDGTRANRYGVYVQEHLHFNEQWSLIA GLRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTNQAEDIGDGFLDPETGNQIELGMKNEW LDGQFMTTLAVYRIEKQNVAQANPLDTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNKTEVVKGVTNDS LTNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWEQTQVRLNLKNIFDK EYAVSGFSERNGHFPGEPRNITLELSHKF >Mature_748_residues GLDQNRHSVKTRFAYSLIALALAQHQSAFAAETVLDKEAPQQTLSTSSPVASPVSTEPAAYEQVKLAAPERIAVHGRAMQ MYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYS GFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDFTGGLTQNLAYRFGAYY QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDAVVL QSILDHQFSDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGF EHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKDTDGTRANRYGVYVQEHLHFNEQWSLIAG LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTNQAEDIGDGFLDPETGNQIELGMKNEWL DGQFMTTLAVYRIEKQNVAQANPLDTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNKTEVVKGVTNDSL TNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWEQTQVRLNLKNIFDKE YAVSGFSERNGHFPGEPRNITLELSHKF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=795, Percent_Identity=23.0188679245283, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI1787344, Length=774, Percent_Identity=24.4186046511628, Blast_Score=142, Evalue=8e-35, Organism=Escherichia coli, GI1787024, Length=768, Percent_Identity=21.484375, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1790743, Length=335, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83562; Mature: 83431
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLDQNRHSVKTRFAYSLIALALAQHQSAFAAETVLDKEAPQQTLSTSSPVASPVSTEPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC AYEQVKLAAPERIAVHGRAMQMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARN HHHEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYSGFSVPQLFNVQRVEVLKGP HHHHHHHHHCHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEECCC ASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDFTGGLTQNLAYRFGAY HHHHCCCCCCCCEEEEEECCCCEECCCEEEEECCCHHHCCCCEECCCCCHHHHHHHHCCH YQQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFL HCCCHHHCCCCCCCCCEECCEEEEEECCCCEEEHHHHHHHHHCCCCEEECEEECCCCCEE VAPSYNANEKSDFQKMDAVVLQSILDHQFSDNFSVKTQIRYLNNDSTQQYHESRGWATLD EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCEEEEC ANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGFEHEFLFGGDYHYVETEYSY CCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEHHCCCCEEEEECCCEEEEEEEEEE KLATDKTGVGNLNIFDLNYGETDPSTYTLQDKDTDGTRANRYGVYVQEHLHFNEQWSLIA EEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEE GLRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTNQAEDIG CCCHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHHHHC DGFLDPETGNQIELGMKNEWLDGQFMTTLAVYRIEKQNVAQANPLDTGDDDGIPALLNLG CCCCCCCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCH EVHSQGVEWTLVGDLTDNLTVTANYAYNKTEVVKGVTNDSLTNTFDSKHFANAPRHQAGI HHHCCCCEEEEEECCCCCEEEEEECCCCHHHHEECCCCCCHHCCCCCCHHCCCCCCCCCC WTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWEQTQVRLNLKNIFDK EEEEEHHHHHHHHHHHHHHCCCEECCCCEEECCEEEEECCCCCCCCCEEEEEEHHHHCCH EYAVSGFSERNGHFPGEPRNITLELSHKF HHHHCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure GLDQNRHSVKTRFAYSLIALALAQHQSAFAAETVLDKEAPQQTLSTSSPVASPVSTEPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCC AYEQVKLAAPERIAVHGRAMQMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARN HHHEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYSGFSVPQLFNVQRVEVLKGP HHHHHHHHHCHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEECCC ASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDFTGGLTQNLAYRFGAY HHHHCCCCCCCCEEEEEECCCCEECCCEEEEECCCHHHCCCCEECCCCCHHHHHHHHCCH YQQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFL HCCCHHHCCCCCCCCCEECCEEEEEECCCCEEEHHHHHHHHHCCCCEEECEEECCCCCEE VAPSYNANEKSDFQKMDAVVLQSILDHQFSDNFSVKTQIRYLNNDSTQQYHESRGWATLD EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCEEEEC ANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGFEHEFLFGGDYHYVETEYSY CCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEHHCCCCEEEEECCCEEEEEEEEEE KLATDKTGVGNLNIFDLNYGETDPSTYTLQDKDTDGTRANRYGVYVQEHLHFNEQWSLIA EEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEE GLRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTNQAEDIG CCCHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHHHHC DGFLDPETGNQIELGMKNEWLDGQFMTTLAVYRIEKQNVAQANPLDTGDDDGIPALLNLG CCCCCCCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCH EVHSQGVEWTLVGDLTDNLTVTANYAYNKTEVVKGVTNDSLTNTFDSKHFANAPRHQAGI HHHCCCCEEEEEECCCCCEEEEEECCCCHHHHEECCCCCCHHCCCCCCHHCCCCCCCCCC WTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWEQTQVRLNLKNIFDK EEEEEHHHHHHHHHHHHHHCCCEECCCCEEECCEEEEECCCCCCCCCEEEEEEHHHHCCH EYAVSGFSERNGHFPGEPRNITLELSHKF HHHHCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]