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The map label for this gene is mmgC [H]

Identifier: 126173955

GI number: 126173955

Start: 2005798

End: 2007588

Strand: Direct

Name: mmgC [H]

Synonym: Sbal_1726

Alternate gene names: 126173955

Gene position: 2005798-2007588 (Clockwise)

Preceding gene: 126173953

Following gene: 126173958

Centisome position: 39.12

GC content: 50.64

Gene sequence:

>1791_bases
ATGCCAGTCTATCAAGCGCCGCTGCGCGACTATCAATTTATCCTCAATGAAATGTTACATATTTATCAGCAAGATGCTCT
TAAGGGGTTCGATGAAATCGATCCAGATCTTGTTGATGCGATCCTGCAAGGTATGGCCGACTTTAGTACTGAAGTCATGC
TGCCGCTCAATAGTGTCGGCGATCTGCAAGGCTGTAAGTTGGTAGATGGCAAGGTGATTACCCCGGAAGGATTTGATAAT
GCCTATCAGCAGTTTGTTGATAATGGCTGGCCGACGCTGACCTGCGATCCTGAATATGGCGGCCAAGGTCTACCCGAAGT
CGTGGGGATTTTTGCAACTGAGATACAAACGGCAACCAACATGGCCTTTGCCATGTATCCTGGTTTGACCCATGGCGCCT
ATGCCGCCATCCATGCCCACGGTAGTGATGCGCTTAAGCAAAAATATTTGAGTAAATTAGTCAGCGGTGAATGGACTGGG
ACAATGAATTTGACCGAGTCCCACGCCGGTACTGACTTAGCCTTATTACGCACCAAAGCCGTGCCTGTATCCGAAGGCGT
TTTTGCTATTACTGGTGAGAAGATTTTTATCTCCTCAGGCGATCACCAACTCACCGACAACATAGTGCATCTAGTATTAG
CCCGCTTGCCGGATGCGCCAGAAGGCGTGAAGGGTATATCTCTGTTTGCGGTACCTAAAGTATTAGTAAATAGCGATGGT
AGCCTAGGCGCGCCGAACACTTTATATGCCAGCGGCCTTGAACATAAGATGGGCATTCACGGTAACTCCACCTGTGTGAT
GGTGTTTGAAGCTGCGCTGGGCGAGCTCGTTGGCGAGCCGCATCAAGGACTGCGCGCCATGTTTACTATGATGAACCAAG
CGCGTTTAGGCGTGGGCGTGCAAGGGCTGGGTGTCTCTGAGATTGCCTATCAAAATGCGCTGGCCTATGCTAAAGACAGA
TTGCAGAGCCGTGCCTTAAGCGGTGCCAAAGCCCCCGAAAAAGCTGCCGACCCGATTTTGGTTCACGGCGATGTGCGCCG
CATGTTGCTGTCGCAAAAAGCCTTTAATGAAGGCGCAAGAGCCTTAGTTGGACAACAAGCTTTGTGGCTTGATGAAGCTG
AGCGCCATACCGATCCTGCCAAAGCGAAAGCGGCATCCCAGTTAGCGGCCCTGTTTACGCCCGTTGTGAAAGGTTTTATC
ACCAACCGTGGTTTTAATGCCTGTGTCGATGCGCAACAAGTATTTGGTGGACATGGTTATATCCATGAGTGGGGCATGGA
GCAATTTGTGCGTGATAGCCGTATTGCGCTGATTTATGAAGGTACTAACGGCATTCAGGCGCTGGATTTAGTGGGGCGTA
AGTTACTTAGCGACCGCGGCGCGGCGATGCAGCAATGGTCGGCTTTAGTGACTGAGTTCATTAAGTCGCATAGCACGAAT
GCGGCGATGCAACCCTATGTGAGTGGTTTAATGGATTGTGCAGGTGATTTGCAAAAGGCCAGTGGTTATTTAGCGACCCA
TGCGGCGACCAATCCAGACATTATTGGCGCAGCTTCAATGGCTTATTTGGAGTTATTTGGGGTGACGGCACTGGCGTGGA
TGTGGGCCAGAAGTGCCGCGGTGGCATTAGCGGCGCTGGAGCAGGGCACTGAAGAAACCGCGTTTTACCAAGCTAAATTG
AAAACTGCTGATTTCTACATGGCTTACTGGGCGGTGCAAGGTCGCAGCCTGCGTAAGCAAATCGAGCAGGCGAGTGAAAT
GCTCACGCAATTGGATGAAGCAATCTTTTAA

Upstream 100 bases:

>100_bases
GGTGCTTTCTTTTTCGGCAAATTTAGCTAAAGTGGTCAGAGCACCAAAGTGGTCAGATCACTTAGTTGAGTTGCAGTCTA
ACAAGAAAAGGGAAGCGATT

Downstream 100 bases:

>100_bases
GCATTCACCTTATAGGCTGAGTGAAGCCTTTGCTTAAGAACAGCTTAAGAAAAGCTCAAAAACCAGCGCATTGTCGCTGG
TTTTTATTTTTGTATAGTTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MPVYQAPLRDYQFILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGDLQGCKLVDGKVITPEGFDN
AYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNMAFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTG
TMNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSDG
SLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDR
LQSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI
TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSHSTN
AAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMWARSAAVALAALEQGTEETAFYQAKL
KTADFYMAYWAVQGRSLRKQIEQASEMLTQLDEAIF

Sequences:

>Translated_596_residues
MPVYQAPLRDYQFILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGDLQGCKLVDGKVITPEGFDN
AYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNMAFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTG
TMNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSDG
SLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDR
LQSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFI
TNRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSHSTN
AAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMWARSAAVALAALEQGTEETAFYQAKL
KTADFYMAYWAVQGRSLRKQIEQASEMLTQLDEAIF
>Mature_595_residues
PVYQAPLRDYQFILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVGDLQGCKLVDGKVITPEGFDNA
YQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATNMAFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGT
MNLTESHAGTDLALLRTKAVPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSDGS
LGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDRL
QSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNEGARALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFIT
NRGFNACVDAQQVFGGHGYIHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSHSTNA
AMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMWARSAAVALAALEQGTEETAFYQAKLK
TADFYMAYWAVQGRSLRKQIEQASEMLTQLDEAIF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=371, Percent_Identity=25.8760107816712, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958412, Length=387, Percent_Identity=25.0645994832041, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI226958414, Length=387, Percent_Identity=25.0645994832041, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4557233, Length=432, Percent_Identity=26.6203703703704, Blast_Score=87, Evalue=6e-17,
Organism=Homo sapiens, GI76496475, Length=332, Percent_Identity=26.5060240963855, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4557235, Length=332, Percent_Identity=26.8072289156627, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI21361497, Length=401, Percent_Identity=26.6832917705736, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4501857, Length=342, Percent_Identity=27.4853801169591, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI7656849, Length=337, Percent_Identity=25.2225519287834, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI187960098, Length=319, Percent_Identity=25.3918495297806, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI4557231, Length=319, Percent_Identity=25.3918495297806, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI87082384, Length=336, Percent_Identity=27.9761904761905, Blast_Score=99, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=27.1232876712329, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=396, Percent_Identity=25, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=374, Percent_Identity=26.7379679144385, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=339, Percent_Identity=26.8436578171091, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=339, Percent_Identity=26.8436578171091, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=424, Percent_Identity=25, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=336, Percent_Identity=26.4880952380952, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=369, Percent_Identity=26.2872628726287, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=373, Percent_Identity=25.7372654155496, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=320, Percent_Identity=23.75, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71990804, Length=185, Percent_Identity=28.6486486486486, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21356377, Length=364, Percent_Identity=27.7472527472527, Blast_Score=102, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24646207, Length=368, Percent_Identity=24.7282608695652, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24666513, Length=385, Percent_Identity=25.4545454545455, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24660351, Length=322, Percent_Identity=25.4658385093168, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64332; Mature: 64201

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYQAPLRDYQFILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
DLQGCKLVDGKVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATN
CCCCCEEECCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHC
MAFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGTMNLTESHAGTDLALLRTKA
EEHEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHEECC
VPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSDG
CCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCC
SLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLGVGV
CCCCCCHHHHCCCCHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
QGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNEGAR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHHHHH
ALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNACVDAQQVFGGHGY
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
IHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSHSTN
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
AAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMWARSAA
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VALAALEQGTEETAFYQAKLKTADFYMAYWAVQGRSLRKQIEQASEMLTQLDEAIF
HHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVYQAPLRDYQFILNEMLHIYQQDALKGFDEIDPDLVDAILQGMADFSTEVMLPLNSVG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
DLQGCKLVDGKVITPEGFDNAYQQFVDNGWPTLTCDPEYGGQGLPEVVGIFATEIQTATN
CCCCCEEECCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHC
MAFAMYPGLTHGAYAAIHAHGSDALKQKYLSKLVSGEWTGTMNLTESHAGTDLALLRTKA
EEHEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHEECC
VPVSEGVFAITGEKIFISSGDHQLTDNIVHLVLARLPDAPEGVKGISLFAVPKVLVNSDG
CCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCC
SLGAPNTLYASGLEHKMGIHGNSTCVMVFEAALGELVGEPHQGLRAMFTMMNQARLGVGV
CCCCCCHHHHCCCCHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
QGLGVSEIAYQNALAYAKDRLQSRALSGAKAPEKAADPILVHGDVRRMLLSQKAFNEGAR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEHHHHHHHHHHHHHHHHHH
ALVGQQALWLDEAERHTDPAKAKAASQLAALFTPVVKGFITNRGFNACVDAQQVFGGHGY
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
IHEWGMEQFVRDSRIALIYEGTNGIQALDLVGRKLLSDRGAAMQQWSALVTEFIKSHSTN
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
AAMQPYVSGLMDCAGDLQKASGYLATHAATNPDIIGAASMAYLELFGVTALAWMWARSAA
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VALAALEQGTEETAFYQAKLKTADFYMAYWAVQGRSLRKQIEQASEMLTQLDEAIF
HHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]