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The map label for this gene is yjjU [H]

Identifier: 126173959

GI number: 126173959

Start: 2011706

End: 2012824

Strand: Direct

Name: yjjU [H]

Synonym: Sbal_1730

Alternate gene names: 126173959

Gene position: 2011706-2012824 (Clockwise)

Preceding gene: 126173958

Following gene: 126173965

Centisome position: 39.23

GC content: 48.61

Gene sequence:

>1119_bases
ATGCACGCCGTCAGCCACTTAGCCTCCAAAGACGCTCAATCTAACGCTAGCCCACAGGTGGCCCTGATTGCAGAAGGTGG
TGGTCAGCGCGGTATTTTCACCGCAGGCGTGCTCGATGCTTGGCTTGATGGCGGATTCGATCCCTTTGATTTATTTATTG
GTACATCTGCAGGTTCACAGAATCTCAGCAGTTTTTTAGCCCGTCAAAAGGGTTATGCCAAACGCTTGATCCGCGGTTTA
TCGCGGCATAAACGTTTCTATCGACTCGGTCGGGGGTTAGTCGGCGGCAATGTGGTCGATTTAGATTGGTATTTTGAGCA
GACTAGACAAGGGATGTTCAAATTAGATCTTAATGCGGCGACGGCCTCACTCGGTCATCGGCAGTTACTGATCACCACTA
CCAATGCCAGTGATCGCAAGGGTTATTTTTTAAGTCCAAGCAGTAAAAGCCAATGGCGCGAATTGCTTAAAGCCTCCAGC
GCATTGCCATTTTTGTATAAACAAGGTGTGAAACTCACGCCTTGGCTAAATGATAATGCCTGTAATAGTGACAAGGCCTG
TAATAACGGCGCGGCTAATCATGGCGGGTCGCATCACAGCGCAGCATTGAGCGAAGCTATCGACAGTGATTTTTATCTCG
ACGGCGGCTTAGCAGCGCCTTTACCTGTGCGTGAGGCCTATCGTCGTGGTGCCCGCAAAATTGTGGTGATCCGCACTGTG
AGCGAGGATTTTCAGGCGCAATCGGCTTGGGTGCATAAACTCAAATCTTGGATTTGTGTTTCTGGGTTTTGCCCGAAAAC
CATAGATTACTTAGTGCAGCACGAACAAGCCTATCAGGATGAATTGGACTTTATCGCTAATCCGCCAGAGGATGTGGAGA
TAGTGCAGATTTTTGCCGCTGAAAATTTGCAGAGTAAGTTACTGGGTAGCACCGATGCCGATTTACGCCATGATTACCAT
GCGGGCATGAATGCCGGAAAGCAGTTTTTAACCCAAGATCCGATGGCATTGACGCAGATGAATGTTCATTTTCAAACTCA
AGTGCAAACCAACGCTCACACTCAAACTCACATTCAAGCTCTCTCTCAAATCAAGCCATTCAGTGCGCTGTCGGCCTAG

Upstream 100 bases:

>100_bases
AATAGTATTTTTCTATTAAGATGATAGCTTCTATCCGTTATCCTTTCTCATTCAGCTTGTTTAGACTCGCCTTATATGAA
TTATTCGATAAGGTTTCCCT

Downstream 100 bases:

>100_bases
TTTGGTATTTTAGCTAAGTCACCATTTTGTACGTGAGTAAGCAATAAAAATAAAAAGCATCAAAATACAAGCGCCACCCT
AGGGTGGCGCTTGTGGTTGG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MHAVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASDRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGAANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFIANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMNAGKQFLTQDPMALTQMNVHFQTQVQTNAHTQTHIQALSQIKPFSALSA

Sequences:

>Translated_372_residues
MHAVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASDRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGAANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFIANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMNAGKQFLTQDPMALTQMNVHFQTQVQTNAHTQTHIQALSQIKPFSALSA
>Mature_372_residues
MHAVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASDRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGAANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFIANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMNAGKQFLTQDPMALTQMNVHFQTQVQTNAHTQTHIQALSQIKPFSALSA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=313, Percent_Identity=36.1022364217252, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 40866; Mature: 40866

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQ
CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHEEEECCCCHH
NLSSFLARQKGYAKRLIRGLSRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEECCHH
TASLGHRQLLITTTNASDRKGYFLSPSSKSQWRELLKASSALPFLYKQGVKLTPWLNDNA
HHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCC
CNSDKACNNGAANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFIANPPEDVEIVQIFAA
CHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
ENLQSKLLGSTDADLRHDYHAGMNAGKQFLTQDPMALTQMNVHFQTQVQTNAHTQTHIQA
HCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEECEEEEEEECCCCCHHHHHHH
LSQIKPFSALSA
HHHCCCHHHHCC
>Mature Secondary Structure
MHAVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQ
CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHEEEECCCCHH
NLSSFLARQKGYAKRLIRGLSRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEECCHH
TASLGHRQLLITTTNASDRKGYFLSPSSKSQWRELLKASSALPFLYKQGVKLTPWLNDNA
HHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCC
CNSDKACNNGAANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFIANPPEDVEIVQIFAA
CHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
ENLQSKLLGSTDADLRHDYHAGMNAGKQFLTQDPMALTQMNVHFQTQVQTNAHTQTHIQA
HCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEECEEEEEEECCCCCHHHHHHH
LSQIKPFSALSA
HHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]