| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is btuB [H]
Identifier: 126173866
GI number: 126173866
Start: 1906515
End: 1909304
Strand: Direct
Name: btuB [H]
Synonym: Sbal_1632
Alternate gene names: 126173866
Gene position: 1906515-1909304 (Clockwise)
Preceding gene: 126173865
Following gene: 126173867
Centisome position: 37.18
GC content: 40.22
Gene sequence:
>2790_bases ATGCGTAATAGAAAATTTCTATCTAATTCAATAAGTTTAGCCTTGGTTGGCGGTGCGGTGCTGACATCGTTAGGAGCCTC ATTTGCTAGCGCAGAAGAAGCAGTTGATTCAGTCGAACGGATTCAGGTAACCGGTTCAAGAATCCAGCGTACAAATGTCG TTACTTCAAGTCCTGTGATGACATTAAGCGCAGCAGATATTAAAGCGAGTGGTGTTACACGTATTGAAGATCTGTTGAAT GATATGCCTCAAGTGTTCGCAGCACAAAACTCTACTGTTTCAAATGGTTCCAGTGGCACCGCAACCGTTGACTTAAGAGG ATTAGGATCACAGCGAACATTGGTTCTCGTCAACGGACGCCGATTACCTGCAGGAAGTATTCTGGGTAGCACTACTGCGG ATTTAAATACAATTCCTGCAAATATGGTTGAAAGGGTTGAAGTCTTAACGGGTGGTTCATCTGCTACTTATGGTTCTGAT GCTATCGGTGGCGTTGTAAACTTTATTTTGAAAAAAGATTTTGAAGGATTCCAATTTGATTATCAATACAGTCTTTATCA ACACGACAATAGCGATAAAGGTGTGCAAAATATCACCACAGCATCTGGTTTCGATGCACCTAATGGTAATGTAACTGACG GTAATGCAAACGATTTCTCTATCATGATGGGAACTAATTTCTCTGGTGATAAAGGAAATATTACAGCCTATGCAACCGTT CGTGATATCGATGCCGTTGTTCAATCCGACCGTGATTATAGTGCTTGCGCATTAACTGATGATGGTGCTGGAGGAATGGA ATGTGGTGGCTCTAGTACAATACCTACTGGTCGTTTTACTGATTTCGCTGATTTTGATTATACCGTTGCTGGTAATCAGT TTATTCCACGTGATGGCCTTTTGTATAATTATGGACCTACAAACTACTTCCAAAGACCAGATAATCGTAGAACTTTTGGT GTGATAGGTAACTATAGTCTCAATGATAATGTTGAGATCTATACAGAACTCAGCATGATGGACGACAGAACCGTTGCGCA AATTGCACCATCAGGAAACTTTTTCACAACTTCAACTCTTGGCTGTGGTAATCCACTTCTTTCTGATCAGCAATTTGATG CAATTTGTGGACAATATGGTTTGACAAAAGACGATACCCGAGAGCTTTATATTGGACGTCGTAATATTGAAGGTGGTCCA CGTCAAGACGATCTCCGTCATACCATGTACCGTGGCGTACTTGGTATAAGAGGGGAAATTAATGATGATTGGACTTATGA TGTTTACGGTAACTATGGAACTACTGCATATATCCAAACTTATCGTAATGATATGTCGAATGCACGTATTGCAAGAAGTT TAGATGTTGTAACAGATCCAGATACAGGCAGTGCTGTATGTCAATCAGTTCTGGATGGATCAGATGCTAGCTGTGTACCA TGGAATATTTTTGAAGCTGGCGGAGTAACACAAGAAGCATTGGATTATTTAATATTACCTTTATATGCGAGAGGCGATAC TGAATCACTACAATTAAATGGCTTCGTTAGTGGTGACTTAACTGACAATGGTTGGGTGTTACCGACAGCAACAACGGGTC TTGGTGTCGTATTCGGTATTGAGCATCGTGAAGAGTCAATGACTTTTGAGCCGGATAGTGGTTTTCAATCAGGTGATGGA GCTGGGCAAGGTGGTGCTACAACAGGTTTAGATGGTAGTTATACAGTAAATGATTTATATGCAGAGCTTGAATTACCTTT ATTAGAAGATAAATTTTTAGCTCAAGATTTAGTACTTGAAGCAGCATATCGATATTCTGATTATTCAACAGACAATACTA CAGATACCTATAAAGTAGGTGTTAACTGGGCACTGAATGATAATGTGCGTATTCGTACAAGTTTGCAGCATGCGGTGAGA GCACCAAACATTGGTGAATTATATGCGTCGCAGTCGCTACAGTTATTCAACTGGGATGTGGATCCATGTTCAACTAGTAG CCCTCAATATTCGTTTGAAGAATGTGCTCGAACAGGTGTTACTAATGGTCAATATGGAAATATCCCTGACAGCCCAGCAG GTCAATACAATGAGCTAGGTGGTGGTAGTCAAGAGCTCACTCCTGAGAAATCAGATACTATATCTGTCGGTGTGGTGCTA ACTCCTACATTCATCGAGAATTTCTCAGTAACGTTTGATTTCTACGATATTACGATTGATGACGCAATTGATACCATTTC ATCCGCTGAAGTGGTTCGTCTTTGTGCAAAAGATATTAATCCTAGCATGTGTAACCTTATTCACCGTAGCTCATCAAATG GCGATTTATGGGTGGGAAGTAATGCTAACAGTGGTTATGTTGAGGCGACTAATATCAATACAGGGAGTTTTAGTACTCGA GGTTTAGATATAGACTCTGCCTATAATTTAGAAACTAGTTTAGGTGATATCCACTTTAATTTAGTAGCAACATATTTAGA AAGTTTAGAATATGAAGCATATGCTGGTGCAGCTCCGTATGATTGTGCTGGGCAGTGGAATCGCGATACCTGTGGTCAGC CTGCACCAAAATGGAGACATATCTTCACTACAACTTGGAACACTCCTTGGGACCTTGATTTGACTGCACGCTGGAGATAT TTTGGTTCTGCAGATGAGTTAAGTGAAGCCGATGATTTAACAACTTTGGATACTGTTAATTATTTTGATGTTGTTGGAAA TTGGCAGGTTCTTGGTAATACTAAACTACAGTTTGGTGTCAACAATTTATTTGATAAAGATCCCAAATAG
Upstream 100 bases:
>100_bases TTGTATTGTGTTTTTATTGTTATTAATTTGTGCTTTATTGGTTTCAATTAAACGCAATGAAATTAAAAATAAAAATAACT AGTACACTGGGAGATCGACA
Downstream 100 bases:
>100_bases TGACAGATGCTCCATCTGGAGAGGGTAATGGTAATACATTCCCTGGTGTATATGATGCATTAGGTCGTTATGTGTATGCT GGAGTTACAGTGACATTCTA
Product: TonB-dependent receptor, plug
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 929; Mature: 929
Protein sequence:
>929_residues MRNRKFLSNSISLALVGGAVLTSLGASFASAEEAVDSVERIQVTGSRIQRTNVVTSSPVMTLSAADIKASGVTRIEDLLN DMPQVFAAQNSTVSNGSSGTATVDLRGLGSQRTLVLVNGRRLPAGSILGSTTADLNTIPANMVERVEVLTGGSSATYGSD AIGGVVNFILKKDFEGFQFDYQYSLYQHDNSDKGVQNITTASGFDAPNGNVTDGNANDFSIMMGTNFSGDKGNITAYATV RDIDAVVQSDRDYSACALTDDGAGGMECGGSSTIPTGRFTDFADFDYTVAGNQFIPRDGLLYNYGPTNYFQRPDNRRTFG VIGNYSLNDNVEIYTELSMMDDRTVAQIAPSGNFFTTSTLGCGNPLLSDQQFDAICGQYGLTKDDTRELYIGRRNIEGGP RQDDLRHTMYRGVLGIRGEINDDWTYDVYGNYGTTAYIQTYRNDMSNARIARSLDVVTDPDTGSAVCQSVLDGSDASCVP WNIFEAGGVTQEALDYLILPLYARGDTESLQLNGFVSGDLTDNGWVLPTATTGLGVVFGIEHREESMTFEPDSGFQSGDG AGQGGATTGLDGSYTVNDLYAELELPLLEDKFLAQDLVLEAAYRYSDYSTDNTTDTYKVGVNWALNDNVRIRTSLQHAVR APNIGELYASQSLQLFNWDVDPCSTSSPQYSFEECARTGVTNGQYGNIPDSPAGQYNELGGGSQELTPEKSDTISVGVVL TPTFIENFSVTFDFYDITIDDAIDTISSAEVVRLCAKDINPSMCNLIHRSSSNGDLWVGSNANSGYVEATNINTGSFSTR GLDIDSAYNLETSLGDIHFNLVATYLESLEYEAYAGAAPYDCAGQWNRDTCGQPAPKWRHIFTTTWNTPWDLDLTARWRY FGSADELSEADDLTTLDTVNYFDVVGNWQVLGNTKLQFGVNNLFDKDPK
Sequences:
>Translated_929_residues MRNRKFLSNSISLALVGGAVLTSLGASFASAEEAVDSVERIQVTGSRIQRTNVVTSSPVMTLSAADIKASGVTRIEDLLN DMPQVFAAQNSTVSNGSSGTATVDLRGLGSQRTLVLVNGRRLPAGSILGSTTADLNTIPANMVERVEVLTGGSSATYGSD AIGGVVNFILKKDFEGFQFDYQYSLYQHDNSDKGVQNITTASGFDAPNGNVTDGNANDFSIMMGTNFSGDKGNITAYATV RDIDAVVQSDRDYSACALTDDGAGGMECGGSSTIPTGRFTDFADFDYTVAGNQFIPRDGLLYNYGPTNYFQRPDNRRTFG VIGNYSLNDNVEIYTELSMMDDRTVAQIAPSGNFFTTSTLGCGNPLLSDQQFDAICGQYGLTKDDTRELYIGRRNIEGGP RQDDLRHTMYRGVLGIRGEINDDWTYDVYGNYGTTAYIQTYRNDMSNARIARSLDVVTDPDTGSAVCQSVLDGSDASCVP WNIFEAGGVTQEALDYLILPLYARGDTESLQLNGFVSGDLTDNGWVLPTATTGLGVVFGIEHREESMTFEPDSGFQSGDG AGQGGATTGLDGSYTVNDLYAELELPLLEDKFLAQDLVLEAAYRYSDYSTDNTTDTYKVGVNWALNDNVRIRTSLQHAVR APNIGELYASQSLQLFNWDVDPCSTSSPQYSFEECARTGVTNGQYGNIPDSPAGQYNELGGGSQELTPEKSDTISVGVVL TPTFIENFSVTFDFYDITIDDAIDTISSAEVVRLCAKDINPSMCNLIHRSSSNGDLWVGSNANSGYVEATNINTGSFSTR GLDIDSAYNLETSLGDIHFNLVATYLESLEYEAYAGAAPYDCAGQWNRDTCGQPAPKWRHIFTTTWNTPWDLDLTARWRY FGSADELSEADDLTTLDTVNYFDVVGNWQVLGNTKLQFGVNNLFDKDPK >Mature_929_residues MRNRKFLSNSISLALVGGAVLTSLGASFASAEEAVDSVERIQVTGSRIQRTNVVTSSPVMTLSAADIKASGVTRIEDLLN DMPQVFAAQNSTVSNGSSGTATVDLRGLGSQRTLVLVNGRRLPAGSILGSTTADLNTIPANMVERVEVLTGGSSATYGSD AIGGVVNFILKKDFEGFQFDYQYSLYQHDNSDKGVQNITTASGFDAPNGNVTDGNANDFSIMMGTNFSGDKGNITAYATV RDIDAVVQSDRDYSACALTDDGAGGMECGGSSTIPTGRFTDFADFDYTVAGNQFIPRDGLLYNYGPTNYFQRPDNRRTFG VIGNYSLNDNVEIYTELSMMDDRTVAQIAPSGNFFTTSTLGCGNPLLSDQQFDAICGQYGLTKDDTRELYIGRRNIEGGP RQDDLRHTMYRGVLGIRGEINDDWTYDVYGNYGTTAYIQTYRNDMSNARIARSLDVVTDPDTGSAVCQSVLDGSDASCVP WNIFEAGGVTQEALDYLILPLYARGDTESLQLNGFVSGDLTDNGWVLPTATTGLGVVFGIEHREESMTFEPDSGFQSGDG AGQGGATTGLDGSYTVNDLYAELELPLLEDKFLAQDLVLEAAYRYSDYSTDNTTDTYKVGVNWALNDNVRIRTSLQHAVR APNIGELYASQSLQLFNWDVDPCSTSSPQYSFEECARTGVTNGQYGNIPDSPAGQYNELGGGSQELTPEKSDTISVGVVL TPTFIENFSVTFDFYDITIDDAIDTISSAEVVRLCAKDINPSMCNLIHRSSSNGDLWVGSNANSGYVEATNINTGSFSTR GLDIDSAYNLETSLGDIHFNLVATYLESLEYEAYAGAAPYDCAGQWNRDTCGQPAPKWRHIFTTTWNTPWDLDLTARWRY FGSADELSEADDLTTLDTVNYFDVVGNWQVLGNTKLQFGVNNLFDKDPK
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=179, Percent_Identity=32.4022346368715, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1788478, Length=138, Percent_Identity=34.0579710144928, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1786798, Length=167, Percent_Identity=32.3353293413174, Blast_Score=73, Evalue=8e-14,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 100755; Mature: 100755
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRKFLSNSISLALVGGAVLTSLGASFASAEEAVDSVERIQVTGSRIQRTNVVTSSPVM CCCCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEECEEEECCCEE TLSAADIKASGVTRIEDLLNDMPQVFAAQNSTVSNGSSGTATVDLRGLGSQRTLVLVNGR EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC RLPAGSILGSTTADLNTIPANMVERVEVLTGGSSATYGSDAIGGVVNFILKKDFEGFQFD CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEE YQYSLYQHDNSDKGVQNITTASGFDAPNGNVTDGNANDFSIMMGTNFSGDKGNITAYATV EEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEH RDIDAVVQSDRDYSACALTDDGAGGMECGGSSTIPTGRFTDFADFDYTVAGNQFIPRDGL HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE LYNYGPTNYFQRPDNRRTFGVIGNYSLNDNVEIYTELSMMDDRTVAQIAPSGNFFTTSTL EEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCC GCGNPLLSDQQFDAICGQYGLTKDDTRELYIGRRNIEGGPRQDDLRHTMYRGVLGIRGEI CCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEECCCC NDDWTYDVYGNYGTTAYIQTYRNDMSNARIARSLDVVTDPDTGSAVCQSVLDGSDASCVP CCCEEEEEECCCCCEEEEEEHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHCCCCCCCCC WNIFEAGGVTQEALDYLILPLYARGDTESLQLNGFVSGDLTDNGWVLPTATTGLGVVFGI CEECCCCCCCHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEEE EHREESMTFEPDSGFQSGDGAGQGGATTGLDGSYTVNDLYAELELPLLEDKFLAQDLVLE EECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEHEEEEEEECCCCHHHHHHHHHHHHH AAYRYSDYSTDNTTDTYKVGVNWALNDNVRIRTSLQHAVRAPNIGELYASQSLQLFNWDV HHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEECHHHHHCCCCHHHHHHCCCEEEEECCC DPCSTSSPQYSFEECARTGVTNGQYGNIPDSPAGQYNELGGGSQELTPEKSDTISVGVVL CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEE TPTFIENFSVTFDFYDITIDDAIDTISSAEVVRLCAKDINPSMCNLIHRSSSNGDLWVGS CCHHHCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEC NANSGYVEATNINTGSFSTRGLDIDSAYNLETSLGDIHFNLVATYLESLEYEAYAGAAPY CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCC DCAGQWNRDTCGQPAPKWRHIFTTTWNTPWDLDLTARWRYFGSADELSEADDLTTLDTVN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCHHHCCCCCCCEEEECCC YFDVVGNWQVLGNTKLQFGVNNLFDKDPK EEEEECCEEEEECCEEEECCHHCCCCCCC >Mature Secondary Structure MRNRKFLSNSISLALVGGAVLTSLGASFASAEEAVDSVERIQVTGSRIQRTNVVTSSPVM CCCCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEECEEEECCCEE TLSAADIKASGVTRIEDLLNDMPQVFAAQNSTVSNGSSGTATVDLRGLGSQRTLVLVNGR EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC RLPAGSILGSTTADLNTIPANMVERVEVLTGGSSATYGSDAIGGVVNFILKKDFEGFQFD CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEE YQYSLYQHDNSDKGVQNITTASGFDAPNGNVTDGNANDFSIMMGTNFSGDKGNITAYATV EEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEH RDIDAVVQSDRDYSACALTDDGAGGMECGGSSTIPTGRFTDFADFDYTVAGNQFIPRDGL HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE LYNYGPTNYFQRPDNRRTFGVIGNYSLNDNVEIYTELSMMDDRTVAQIAPSGNFFTTSTL EEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCC GCGNPLLSDQQFDAICGQYGLTKDDTRELYIGRRNIEGGPRQDDLRHTMYRGVLGIRGEI CCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEECCCC NDDWTYDVYGNYGTTAYIQTYRNDMSNARIARSLDVVTDPDTGSAVCQSVLDGSDASCVP CCCEEEEEECCCCCEEEEEEHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHCCCCCCCCC WNIFEAGGVTQEALDYLILPLYARGDTESLQLNGFVSGDLTDNGWVLPTATTGLGVVFGI CEECCCCCCCHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEEE EHREESMTFEPDSGFQSGDGAGQGGATTGLDGSYTVNDLYAELELPLLEDKFLAQDLVLE EECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEHEEEEEEECCCCHHHHHHHHHHHHH AAYRYSDYSTDNTTDTYKVGVNWALNDNVRIRTSLQHAVRAPNIGELYASQSLQLFNWDV HHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEECHHHHHCCCCHHHHHHCCCEEEEECCC DPCSTSSPQYSFEECARTGVTNGQYGNIPDSPAGQYNELGGGSQELTPEKSDTISVGVVL CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEE TPTFIENFSVTFDFYDITIDDAIDTISSAEVVRLCAKDINPSMCNLIHRSSSNGDLWVGS CCHHHCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEC NANSGYVEATNINTGSFSTRGLDIDSAYNLETSLGDIHFNLVATYLESLEYEAYAGAAPY CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCC DCAGQWNRDTCGQPAPKWRHIFTTTWNTPWDLDLTARWRYFGSADELSEADDLTTLDTVN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCHHHCCCCCCCEEEECCC YFDVVGNWQVLGNTKLQFGVNNLFDKDPK EEEEECCEEEEECCEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA