| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is btuB [H]
Identifier: 126173867
GI number: 126173867
Start: 1910001
End: 1912817
Strand: Direct
Name: btuB [H]
Synonym: Sbal_1633
Alternate gene names: 126173867
Gene position: 1910001-1912817 (Clockwise)
Preceding gene: 126173866
Following gene: 126173868
Centisome position: 37.25
GC content: 40.79
Gene sequence:
>2817_bases ATGCATAAGAATAATTTATTAGCTAAATCAGTGCGTTTTGCTTTGATTAGTGGTGTGGCAGTTTCAACCTTAAGTACATT TACTGCATTCGCTGCAGAAGAAGATGGCTCAAAGGTCGAGCGTATTGAAGTTACTGGTTCGCGAATCAAACGAACTGATA TGGAAACCACTGTTCCCATTACAGTTTTATCTAGAGAAGATATAGCTCAAACAGGTGCAATTAACGTTGCAGATATTCTG AACTCGTCACCTGTAACAATTGCAGGCTCAGATCAGTCTAATAGTGCCTTTACTACATCTACAGTTGGTCTTAATACAAC TTCATTGCGTAACTTAGGTGACTCAAGAACGTTAGTTCTTGTTAATGGCCGCAGATTTGTTTCTGGTGTTGATCCTTCGA GTGGATATGCAGTTGATTTAAACGCAATTCCAACTTCGATGATTGAGCGTATCGAAATTTTAAAAAGTGCATCTTCAGCT ATCTACGGTTCAGATGCTGTAGCCGGTGTTGTTAACATCATCACTCGTAAAGATTTTGACGGTGTAGAGGTAAATGCTCA AACTGGTATTTCTGGAGAAAGTGATCGTAAGACCAAAACTGTTAGCGTCACATCTGGTAAGACTTGGTCAGGTGGTAATG CTTGGATTTCTCTAGGCTATGATGATGATGAAGGTATTAAAGCAACAGATAGAGATTTTTCTAAGCAAGATCTGGCGATA TTACTTGATGATGATGGTAATGAGTATGCAGGCCCAGTTAACTCTTCATTCCCACCACAAGGTCGTATAGGGAAATATAA TGGCGACGGTACTCTATATTCAGGTACAACGGGTAGCTTTAACCGAGCATCATATCGTCAATTAGTCACTCCGTTGGAGC GTAAGTATGCAGCGGCAGGCTTGACTATGGAGCTTGCAGAAAACGTATCGATGTTCACTGAATTGAATTGGAATACGACT AAAACTAAAGATTCGACAATTGAGCCTACCCCGTTAGATGTTGTAAATGATGTGTGGTTGAAAAACCGTAATGGTAAAGG TGGAATGGATATTAATTCGCCTCTGATTCCTGATGCCTTACGTAATGCTTTAATTGCAGATGGTATTACAAATTTAAACC AAACATCTTTTGTTAGACGTTTAGTTGAGTTTGGTGCTCGTTCTACTGACTTAGAAAGAGATACTGTGCGTATTGCTACT GGTGTTGATTGGGCAATCGATGATACTTGGACATCTCAAACATATTTAACTTGGGGTCGTACAGATCAATCACAAGATAA TGGCGGCCAAGTAAACAAGGAGCGTGCAGCCCTTGCGTTGGATGTGATTAAAGATGCTAATGGTGACTTAGTTTGTGCTA GTGAATTAGCACGTTTACAAGGTTGCGTTCCATTAGATATGTTTGGCGCTGGTACGGTATCAGATGCAGCTGTGAAGTAT ATTGAATCTCCAGCAAAAGCAAATGGTCAAGCAGAGCAATTTGTATTAGGAAGTAGTGTGACAGGATCTTTACCTGTAGC TTTACCAGGTGGTGATATTGGCGTTGCAATGGGGTTAGAGTATCGTGAAGAACGTGGCGTTTACAGCCCTGGGGATTTAG CTCAAACAGGTGCATCAAGTACTAACCAATCAGATCCTACTGATGGTAAATTGTACTCAAAAGACGTTTATGTTGAGGCA ATTCTTCCCGTCCTTGAAAATTTAGAATTTGATCTAGCGGCTCGATATGCTGATCATTCTATTACTGGTGGTGATTGGAC ATGGAACGCTGGCTTACAGTACACGCCATTTGAATCATTTAAAGTGAGGGCATCAGCTGCTACAGCAATCCGTACTCCAA ATATCTCAGATTTATTTGGTGGACGCGGTGAAACTTTTGGTAATGTTGCTGATCCTTGTGATGGTGTGACAGCTGCTACT ACTGGTAATGCGGCAGCTAATTGTCGCGCAATTCAAGCCGTAAGTGATCGTATTGCTGCTGATGGTGCTTTTACATTGAC GCAAGCTGAGCGTCAAGGCACGGGTGGTACGCAAGGTGGTAACCCAGATGTCAAAGCGGAAACTGCTGATACTTGGAGTG CAGGTATTATTTGGCAAATCGTTGATGATTTAGCATTTACGTTGGATTACTATGATATCTCTGTGAAGGATGCAATTTCT ACAACAAGTCGCACAACAGTGTTGAACCGTTGTTTTGATGTTGATGCAAGTCAGTTCTCACAAAATTGTAATGGAGCTGC TATACGCGATCAGAAAGGTGCTTTGATTGAAGTTCATTCTGGGACATCTAACGAAAATAACATTGATACTTCAGGTATTG ATGCTGAATTTAATTATACGACTGATTTAGGCCCAGGTAGTTTTAAAGCTCAACTAGTTTGGAACTATACAAATGAATAT GTTGTTACAGGTATTCTATCTGGTGAGGCCATTGATTATGTCGGTGATGTTACGCATCCAGAACATAGAGCTAACTTGAA CTTGTCCTATGCACTTGATGAAATGAGTTTCGCATGGCGTATGCGTTACTGGGATTCAGTAGTTGACTCAGTAGATGAAA GCAATGGTAACTTCACAGATGGTGCCTCTTTAACTACTTTTAACGATATTGATGCGGTTATATACCATGATGTAAATGCG AGCTATACCTTTGCAAATGGATGGGAAGCAATGGTAGGTGTCCGTAATTTATTTGATAAACAACCACCATTATTACCGCA AGGTACTAACTCTGGGGCTACCGGGATTAATACTGCATCAGAAGCTTATGATGTAACCGGACGTTATTTCTATGCAGGTG TTACTGCTAAGTTCTAA
Upstream 100 bases:
>100_bases TCGCGCCATGATTGTGCTGGTATCGAACTTAGGTTAGAAGTCGTCGGTGAGATGTAGACGAAAAAATAATAAAGACATAG TATGTCAAGGGAGATAGACA
Downstream 100 bases:
>100_bases TCGAAAGTTGTAGTTTAGAAGCATTGAATGAATAAAGCCGGATCTTTTGATCCGGTTTTTTATTTTCTGAGCATACAAAC TACAGAATCGACAATTAGTG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 938; Mature: 938
Protein sequence:
>938_residues MHKNNLLAKSVRFALISGVAVSTLSTFTAFAAEEDGSKVERIEVTGSRIKRTDMETTVPITVLSREDIAQTGAINVADIL NSSPVTIAGSDQSNSAFTTSTVGLNTTSLRNLGDSRTLVLVNGRRFVSGVDPSSGYAVDLNAIPTSMIERIEILKSASSA IYGSDAVAGVVNIITRKDFDGVEVNAQTGISGESDRKTKTVSVTSGKTWSGGNAWISLGYDDDEGIKATDRDFSKQDLAI LLDDDGNEYAGPVNSSFPPQGRIGKYNGDGTLYSGTTGSFNRASYRQLVTPLERKYAAAGLTMELAENVSMFTELNWNTT KTKDSTIEPTPLDVVNDVWLKNRNGKGGMDINSPLIPDALRNALIADGITNLNQTSFVRRLVEFGARSTDLERDTVRIAT GVDWAIDDTWTSQTYLTWGRTDQSQDNGGQVNKERAALALDVIKDANGDLVCASELARLQGCVPLDMFGAGTVSDAAVKY IESPAKANGQAEQFVLGSSVTGSLPVALPGGDIGVAMGLEYREERGVYSPGDLAQTGASSTNQSDPTDGKLYSKDVYVEA ILPVLENLEFDLAARYADHSITGGDWTWNAGLQYTPFESFKVRASAATAIRTPNISDLFGGRGETFGNVADPCDGVTAAT TGNAAANCRAIQAVSDRIAADGAFTLTQAERQGTGGTQGGNPDVKAETADTWSAGIIWQIVDDLAFTLDYYDISVKDAIS TTSRTTVLNRCFDVDASQFSQNCNGAAIRDQKGALIEVHSGTSNENNIDTSGIDAEFNYTTDLGPGSFKAQLVWNYTNEY VVTGILSGEAIDYVGDVTHPEHRANLNLSYALDEMSFAWRMRYWDSVVDSVDESNGNFTDGASLTTFNDIDAVIYHDVNA SYTFANGWEAMVGVRNLFDKQPPLLPQGTNSGATGINTASEAYDVTGRYFYAGVTAKF
Sequences:
>Translated_938_residues MHKNNLLAKSVRFALISGVAVSTLSTFTAFAAEEDGSKVERIEVTGSRIKRTDMETTVPITVLSREDIAQTGAINVADIL NSSPVTIAGSDQSNSAFTTSTVGLNTTSLRNLGDSRTLVLVNGRRFVSGVDPSSGYAVDLNAIPTSMIERIEILKSASSA IYGSDAVAGVVNIITRKDFDGVEVNAQTGISGESDRKTKTVSVTSGKTWSGGNAWISLGYDDDEGIKATDRDFSKQDLAI LLDDDGNEYAGPVNSSFPPQGRIGKYNGDGTLYSGTTGSFNRASYRQLVTPLERKYAAAGLTMELAENVSMFTELNWNTT KTKDSTIEPTPLDVVNDVWLKNRNGKGGMDINSPLIPDALRNALIADGITNLNQTSFVRRLVEFGARSTDLERDTVRIAT GVDWAIDDTWTSQTYLTWGRTDQSQDNGGQVNKERAALALDVIKDANGDLVCASELARLQGCVPLDMFGAGTVSDAAVKY IESPAKANGQAEQFVLGSSVTGSLPVALPGGDIGVAMGLEYREERGVYSPGDLAQTGASSTNQSDPTDGKLYSKDVYVEA ILPVLENLEFDLAARYADHSITGGDWTWNAGLQYTPFESFKVRASAATAIRTPNISDLFGGRGETFGNVADPCDGVTAAT TGNAAANCRAIQAVSDRIAADGAFTLTQAERQGTGGTQGGNPDVKAETADTWSAGIIWQIVDDLAFTLDYYDISVKDAIS TTSRTTVLNRCFDVDASQFSQNCNGAAIRDQKGALIEVHSGTSNENNIDTSGIDAEFNYTTDLGPGSFKAQLVWNYTNEY VVTGILSGEAIDYVGDVTHPEHRANLNLSYALDEMSFAWRMRYWDSVVDSVDESNGNFTDGASLTTFNDIDAVIYHDVNA SYTFANGWEAMVGVRNLFDKQPPLLPQGTNSGATGINTASEAYDVTGRYFYAGVTAKF >Mature_938_residues MHKNNLLAKSVRFALISGVAVSTLSTFTAFAAEEDGSKVERIEVTGSRIKRTDMETTVPITVLSREDIAQTGAINVADIL NSSPVTIAGSDQSNSAFTTSTVGLNTTSLRNLGDSRTLVLVNGRRFVSGVDPSSGYAVDLNAIPTSMIERIEILKSASSA IYGSDAVAGVVNIITRKDFDGVEVNAQTGISGESDRKTKTVSVTSGKTWSGGNAWISLGYDDDEGIKATDRDFSKQDLAI LLDDDGNEYAGPVNSSFPPQGRIGKYNGDGTLYSGTTGSFNRASYRQLVTPLERKYAAAGLTMELAENVSMFTELNWNTT KTKDSTIEPTPLDVVNDVWLKNRNGKGGMDINSPLIPDALRNALIADGITNLNQTSFVRRLVEFGARSTDLERDTVRIAT GVDWAIDDTWTSQTYLTWGRTDQSQDNGGQVNKERAALALDVIKDANGDLVCASELARLQGCVPLDMFGAGTVSDAAVKY IESPAKANGQAEQFVLGSSVTGSLPVALPGGDIGVAMGLEYREERGVYSPGDLAQTGASSTNQSDPTDGKLYSKDVYVEA ILPVLENLEFDLAARYADHSITGGDWTWNAGLQYTPFESFKVRASAATAIRTPNISDLFGGRGETFGNVADPCDGVTAAT TGNAAANCRAIQAVSDRIAADGAFTLTQAERQGTGGTQGGNPDVKAETADTWSAGIIWQIVDDLAFTLDYYDISVKDAIS TTSRTTVLNRCFDVDASQFSQNCNGAAIRDQKGALIEVHSGTSNENNIDTSGIDAEFNYTTDLGPGSFKAQLVWNYTNEY VVTGILSGEAIDYVGDVTHPEHRANLNLSYALDEMSFAWRMRYWDSVVDSVDESNGNFTDGASLTTFNDIDAVIYHDVNA SYTFANGWEAMVGVRNLFDKQPPLLPQGTNSGATGINTASEAYDVTGRYFYAGVTAKF
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=180, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788478, Length=161, Percent_Identity=34.7826086956522, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 100351; Mature: 100351
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKNNLLAKSVRFALISGVAVSTLSTFTAFAAEEDGSKVERIEVTGSRIKRTDMETTVPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHEECCCCCEEEE TVLSREDIAQTGAINVADILNSSPVTIAGSDQSNSAFTTSTVGLNTTSLRNLGDSRTLVL EEECCHHHHHCCCEEHHHHCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCCCEEEE VNGRRFVSGVDPSSGYAVDLNAIPTSMIERIEILKSASSAIYGSDAVAGVVNIITRKDFD ECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC GVEVNAQTGISGESDRKTKTVSVTSGKTWSGGNAWISLGYDDDEGIKATDRDFSKQDLAI CEEEEECCCCCCCCCCCEEEEEEECCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEE LLDDDGNEYAGPVNSSFPPQGRIGKYNGDGTLYSGTTGSFNRASYRQLVTPLERKYAAAG EEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC LTMELAENVSMFTELNWNTTKTKDSTIEPTPLDVVNDVWLKNRNGKGGMDINSPLIPDAL CHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCHHHH RNALIADGITNLNQTSFVRRLVEFGARSTDLERDTVRIATGVDWAIDDTWTSQTYLTWGR HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEECC TDQSQDNGGQVNKERAALALDVIKDANGDLVCASELARLQGCVPLDMFGAGTVSDAAVKY CCCCCCCCCCCCHHHHHEEEEHHHCCCCCEEEHHHHHHHHCCCCEECCCCCCHHHHHHHH IESPAKANGQAEQFVLGSSVTGSLPVALPGGDIGVAMGLEYREERGVYSPGDLAQTGASS HHCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEECCEEHHHCCCCCCCCHHHCCCCC TNQSDPTDGKLYSKDVYVEAILPVLENLEFDLAARYADHSITGGDWTWNAGLQYTPFESF CCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEECCCEEECCCHHE KVRASAATAIRTPNISDLFGGRGETFGNVADPCDGVTAATTGNAAANCRAIQAVSDRIAA EEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHC DGAFTLTQAERQGTGGTQGGNPDVKAETADTWSAGIIWQIVDDLAFTLDYYDISVKDAIS CCCEEEEEHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEEEEEEEEHHHHHC TTSRTTVLNRCFDVDASQFSQNCNGAAIRDQKGALIEVHSGTSNENNIDTSGIDAEFNYT CCHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEE TDLGPGSFKAQLVWNYTNEYVVTGILSGEAIDYVGDVTHPEHRANLNLSYALDEMSFAWR ECCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHCCCCCCHHHCCCEEEEEEHHHHHHHH MRYWDSVVDSVDESNGNFTDGASLTTFNDIDAVIYHDVNASYTFANGWEAMVGVRNLFDK HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHCC QPPLLPQGTNSGATGINTASEAYDVTGRYFYAGVTAKF CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEECC >Mature Secondary Structure MHKNNLLAKSVRFALISGVAVSTLSTFTAFAAEEDGSKVERIEVTGSRIKRTDMETTVPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHEECCCCCEEEE TVLSREDIAQTGAINVADILNSSPVTIAGSDQSNSAFTTSTVGLNTTSLRNLGDSRTLVL EEECCHHHHHCCCEEHHHHCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCCCEEEE VNGRRFVSGVDPSSGYAVDLNAIPTSMIERIEILKSASSAIYGSDAVAGVVNIITRKDFD ECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC GVEVNAQTGISGESDRKTKTVSVTSGKTWSGGNAWISLGYDDDEGIKATDRDFSKQDLAI CEEEEECCCCCCCCCCCEEEEEEECCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEE LLDDDGNEYAGPVNSSFPPQGRIGKYNGDGTLYSGTTGSFNRASYRQLVTPLERKYAAAG EEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCC LTMELAENVSMFTELNWNTTKTKDSTIEPTPLDVVNDVWLKNRNGKGGMDINSPLIPDAL CHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCHHHH RNALIADGITNLNQTSFVRRLVEFGARSTDLERDTVRIATGVDWAIDDTWTSQTYLTWGR HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEECC TDQSQDNGGQVNKERAALALDVIKDANGDLVCASELARLQGCVPLDMFGAGTVSDAAVKY CCCCCCCCCCCCHHHHHEEEEHHHCCCCCEEEHHHHHHHHCCCCEECCCCCCHHHHHHHH IESPAKANGQAEQFVLGSSVTGSLPVALPGGDIGVAMGLEYREERGVYSPGDLAQTGASS HHCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEECCEEHHHCCCCCCCCHHHCCCCC TNQSDPTDGKLYSKDVYVEAILPVLENLEFDLAARYADHSITGGDWTWNAGLQYTPFESF CCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEECCCEEECCCHHE KVRASAATAIRTPNISDLFGGRGETFGNVADPCDGVTAATTGNAAANCRAIQAVSDRIAA EEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHC DGAFTLTQAERQGTGGTQGGNPDVKAETADTWSAGIIWQIVDDLAFTLDYYDISVKDAIS CCCEEEEEHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEEEEEEEEHHHHHC TTSRTTVLNRCFDVDASQFSQNCNGAAIRDQKGALIEVHSGTSNENNIDTSGIDAEFNYT CCHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEE TDLGPGSFKAQLVWNYTNEYVVTGILSGEAIDYVGDVTHPEHRANLNLSYALDEMSFAWR ECCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHCCCCCCHHHCCCEEEEEEHHHHHHHH MRYWDSVVDSVDESNGNFTDGASLTTFNDIDAVIYHDVNASYTFANGWEAMVGVRNLFDK HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHCC QPPLLPQGTNSGATGINTASEAYDVTGRYFYAGVTAKF CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA