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The map label for this gene is rseB [H]

Identifier: 126173435

GI number: 126173435

Start: 1378958

End: 1379890

Strand: Direct

Name: rseB [H]

Synonym: Sbal_1197

Alternate gene names: 126173435

Gene position: 1378958-1379890 (Clockwise)

Preceding gene: 126173434

Following gene: 126173436

Centisome position: 26.89

GC content: 46.84

Gene sequence:

>933_bases
TTGCGTCTAATCCTGTTGGCTTTATTAGCCTTGGTCTTTCCTGCGATGGCGCAGGAAGATATGCCTGCCAAAGTCTGGCT
CGAGAAAATGAGTCAGGCCTTACGAGAGAAAGAGTTTAAAGCATCGATTATTCAACTTCAGGCCGATCATATTCGGCCTT
TGGTTTACCTGCACGGTAAGGTGAATAATCAAGAAGTAGCCTTTCTAGAATACCTTAATGGTCCACCTAAAAATGCTGTG
CGTGTCGGCAATCGTGTCACTTTTATTGAGCACGATGAGCCTGCATACAGTATTGTTTCTAATCATATCCAAGGTGTTTG
GCCTGCCGCTTTTTCTGCCAATATGGCGGATTTAGAAGTGGGTTATCAGTTTGTGCTTGGTGGTCGCACCCGTATTGCTG
GTCGTCCGGGGCAAATGATCCGCCTGTTGCCCAATGATGAATTCCGTTATGGCTTTCAAATTTGGCTCGATATGGAAACC
TATCTGCCCCTGAGATACGACATGCTGACTCAAGATAAGCAATTACTTGAGCAGATCATGGTGATTGAACTCATCGAATT
CAGCGAGCCGCCAGCCATTTTGCAGGAAGCCTATAAGCAAGAATGGCCAGCAGTTATCGATCAAGCCGAGCGCCAAGACG
GTCAAAACTGGCAATTTGCTTGGTTACCCGCAGGTTTTACTGTGGTCGTGCGTGATCACCATAGATTGATTGGCAGCCAT
GAGGCCGTGGAATACATAGCACTAACTGATGGGCTAGCGAGTATCTCCGTTTATGTTGCGAGAGCAAGTACAAGTCAATT
GCCTGAGGAGTTAATCACCCGCAATGGTTTGTCGTTAGTCTCAGAAAAAGTGGGTAATGCCGAAGTGGTTGCTGTGGGTA
AAGTGCCGACAGAAACCCTAACACGCATTGCTAAAAGTCTGACGCTAGAGTAG

Upstream 100 bases:

>100_bases
TCAAGATCATATGTTGCAACAACGATTGAATACCGGTGCGGTTGTAGAGGACAATACCGAGGTCGTACCCGTTCCGGTCA
ATCAATAACGAGGAGTTAGC

Downstream 100 bases:

>100_bases
GACGCCGATTATGATGGAAGAAATTGCTCGAGTCGTCGCCAGTGATAGCCAAGGCTGGTTGACGGTTGAAGTCGAACTTA
AGAGTACCTGCAAGAGCTGC

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRLILLALLALVFPAMAQEDMPAKVWLEKMSQALREKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDEPAYSIVSNHIQGVWPAAFSANMADLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEFRYGFQIWLDMET
YLPLRYDMLTQDKQLLEQIMVIELIEFSEPPAILQEAYKQEWPAVIDQAERQDGQNWQFAWLPAGFTVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARASTSQLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLTRIAKSLTLE

Sequences:

>Translated_310_residues
MRLILLALLALVFPAMAQEDMPAKVWLEKMSQALREKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDEPAYSIVSNHIQGVWPAAFSANMADLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEFRYGFQIWLDMET
YLPLRYDMLTQDKQLLEQIMVIELIEFSEPPAILQEAYKQEWPAVIDQAERQDGQNWQFAWLPAGFTVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARASTSQLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLTRIAKSLTLE
>Mature_310_residues
MRLILLALLALVFPAMAQEDMPAKVWLEKMSQALREKEFKASIIQLQADHIRPLVYLHGKVNNQEVAFLEYLNGPPKNAV
RVGNRVTFIEHDEPAYSIVSNHIQGVWPAAFSANMADLEVGYQFVLGGRTRIAGRPGQMIRLLPNDEFRYGFQIWLDMET
YLPLRYDMLTQDKQLLEQIMVIELIEFSEPPAILQEAYKQEWPAVIDQAERQDGQNWQFAWLPAGFTVVVRDHHRLIGSH
EAVEYIALTDGLASISVYVARASTSQLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETLTRIAKSLTLE

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=301, Percent_Identity=29.9003322259136, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35023; Mature: 35023

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILLALLALVFPAMAQEDMPAKVWLEKMSQALREKEFKASIIQLQADHIRPLVYLHGK
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCEEEEEECC
VNNQEVAFLEYLNGPPKNAVRVGNRVTFIEHDEPAYSIVSNHIQGVWPAAFSANMADLEV
CCCCEEEEEECCCCCCCHHEECCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCHHHHC
GYQFVLGGRTRIAGRPGQMIRLLPNDEFRYGFQIWLDMETYLPLRYDMLTQDKQLLEQIM
CEEEEECCCEEECCCCCCEEEECCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHH
VIELIEFSEPPAILQEAYKQEWPAVIDQAERQDGQNWQFAWLPAGFTVVVRDHHRLIGSH
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEEECHHHHHCCH
EAVEYIALTDGLASISVYVARASTSQLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETL
HHHEEEEECCCHHEEEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCHHHH
TRIAKSLTLE
HHHHHHHCCC
>Mature Secondary Structure
MRLILLALLALVFPAMAQEDMPAKVWLEKMSQALREKEFKASIIQLQADHIRPLVYLHGK
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCEEEEEECC
VNNQEVAFLEYLNGPPKNAVRVGNRVTFIEHDEPAYSIVSNHIQGVWPAAFSANMADLEV
CCCCEEEEEECCCCCCCHHEECCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCHHHHC
GYQFVLGGRTRIAGRPGQMIRLLPNDEFRYGFQIWLDMETYLPLRYDMLTQDKQLLEQIM
CEEEEECCCEEECCCCCCEEEECCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHH
VIELIEFSEPPAILQEAYKQEWPAVIDQAERQDGQNWQFAWLPAGFTVVVRDHHRLIGSH
HHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEEECHHHHHCCH
EAVEYIALTDGLASISVYVARASTSQLPEELITRNGLSLVSEKVGNAEVVAVGKVPTETL
HHHEEEEECCCHHEEEEEEEECCHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCHHHH
TRIAKSLTLE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]