Click here to switch to the map view.

The map label for this gene is rseC [C]

Identifier: 126173436

GI number: 126173436

Start: 1379901

End: 1380374

Strand: Direct

Name: rseC [C]

Synonym: Sbal_1198

Alternate gene names: 126173436

Gene position: 1379901-1380374 (Clockwise)

Preceding gene: 126173435

Following gene: 126173437

Centisome position: 26.91

GC content: 48.52

Gene sequence:

>474_bases
ATGATGGAAGAAATTGCTCGAGTCGTCGCCAGTGATAGCCAAGGCTGGTTGACGGTTGAAGTCGAACTTAAGAGTACCTG
CAAGAGCTGCAGTAACAGTGAGTCTTGCGGGACTTCTGCTGTCGCTCAGGCTTTTTCCTCGAAAACCCAGCAATTTTCGA
TTCAGAGTGACCGCCGCTGCGAGGCGGGTGAGTTACTCAAACTAGGACTTCCCGAGAGCGTAATCCTCAAAGCAGCGGCA
TTAATCTATTTAATGCCGCTGTTTGGTTTGTTTGTTGGCGCGGCGTTAGGACAATTTTTAGGCCAGTTGCTTGAGTTTAA
TCCTAACCTAGGTGCCATGGGCTTTGCGGCCGTTGGTGCCTTGCTTGCGTGGTCTTTTGGTAAGCAACAGGCCAAACGCT
TAGAAGTCGATGCTCAACCTGTGATTTTGGCCTATTTGGGCATGAGCATCAATTTACAAGAATTAGCTCAATAA

Upstream 100 bases:

>100_bases
GAAAAAGTGGGTAATGCCGAAGTGGTTGCTGTGGGTAAAGTGCCGACAGAAACCCTAACACGCATTGCTAAAAGTCTGAC
GCTAGAGTAGGACGCCGATT

Downstream 100 bases:

>100_bases
TTTCAATATGTTATTTTTTATCAAATAACAGCTAACTGCGGTTTTGGGCGTTGTTTTATCGGTCTGTCCTAAGTAGGAGT
GAATGTGATTGGTATTGAAA

Product: positive regulator of sigma E, RseC/MucC

Products: NA

Alternate protein names: Positive Regulator Of Sigma E RseC/MucC; Positive Regulator Of Sigma(E) RseC/MucC

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MMEEIARVVASDSQGWLTVEVELKSTCKSCSNSESCGTSAVAQAFSSKTQQFSIQSDRRCEAGELLKLGLPESVILKAAA
LIYLMPLFGLFVGAALGQFLGQLLEFNPNLGAMGFAAVGALLAWSFGKQQAKRLEVDAQPVILAYLGMSINLQELAQ

Sequences:

>Translated_157_residues
MMEEIARVVASDSQGWLTVEVELKSTCKSCSNSESCGTSAVAQAFSSKTQQFSIQSDRRCEAGELLKLGLPESVILKAAA
LIYLMPLFGLFVGAALGQFLGQLLEFNPNLGAMGFAAVGALLAWSFGKQQAKRLEVDAQPVILAYLGMSINLQELAQ
>Mature_157_residues
MMEEIARVVASDSQGWLTVEVELKSTCKSCSNSESCGTSAVAQAFSSKTQQFSIQSDRRCEAGELLKLGLPESVILKAAA
LIYLMPLFGLFVGAALGQFLGQLLEFNPNLGAMGFAAVGALLAWSFGKQQAKRLEVDAQPVILAYLGMSINLQELAQ

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788923, Length=148, Percent_Identity=31.0810810810811, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16780; Mature: 16780

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEEIARVVASDSQGWLTVEVELKSTCKSCSNSESCGTSAVAQAFSSKTQQFSIQSDRRC
CHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
EAGELLKLGLPESVILKAAALIYLMPLFGLFVGAALGQFLGQLLEFNPNLGAMGFAAVGA
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLAWSFGKQQAKRLEVDAQPVILAYLGMSINLQELAQ
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MMEEIARVVASDSQGWLTVEVELKSTCKSCSNSESCGTSAVAQAFSSKTQQFSIQSDRRC
CHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
EAGELLKLGLPESVILKAAALIYLMPLFGLFVGAALGQFLGQLLEFNPNLGAMGFAAVGA
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLAWSFGKQQAKRLEVDAQPVILAYLGMSINLQELAQ
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA