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The map label for this gene is rseA [H]

Identifier: 126173434

GI number: 126173434

Start: 1378319

End: 1378945

Strand: Direct

Name: rseA [H]

Synonym: Sbal_1196

Alternate gene names: 126173434

Gene position: 1378319-1378945 (Clockwise)

Preceding gene: 126173433

Following gene: 126173435

Centisome position: 26.88

GC content: 48.17

Gene sequence:

>627_bases
ATGGATAAATTAGGTCAAGAATGGGTATCTGCCGCAGTCGATGGAGAGACTGATGCGCAGACCATGGCAGAGTTATCTGC
TGATACACATTCACATGATAAATGGCATAACTATCATATGATAGGCGATGCCATGCGTGGCGAGTTGCCGCAGAATATTG
TGTTAGATCTCTCTGCTAGCATTGCCGCCGCCATTGAGCTTGAGCCAGCTATAGTTGCGCCTAAGCATCATGCGTCTAAC
GTTGCTGCACCTGTAACCCCGCAAATTGCCGCCAATGCGCAGCAAAACCGCGTCGTACCTTTGTTTAAGCAATTTGGCCA
ATATGCCATTGCTGCGACGGTTGCTATGTTTGCGATTGTCGGTGTGCAGAATTACAATCAGAGCGCCGATGATGCCGCGT
CACCATCGCCCGTATTGATTACCAGACCGCTAATTGGTAGCGCATCACCTGTGAGCCTACAAACGGGTCCAGTTCAACAG
AATCAAGGTTATACCAATGATCAGGTGAACGAGCAGCGTCGCCGAATTAATACTTATATTCAAGATCATATGTTGCAACA
ACGATTGAATACCGGTGCGGTTGTAGAGGACAATACCGAGGTCGTACCCGTTCCGGTCAATCAATAA

Upstream 100 bases:

>100_bases
GTATCTTCCGAGCTCGAGAGGCAATCGATAAAAAGCTCCAGCCGTTGCTGGAAGCCTAAATTCTTATTTTAAGAAACCCT
TATATTTAGACAGGTGAAAA

Downstream 100 bases:

>100_bases
CGAGGAGTTAGCTTGCGTCTAATCCTGTTGGCTTTATTAGCCTTGGTCTTTCCTGCGATGGCGCAGGAAGATATGCCTGC
CAAAGTCTGGCTCGAGAAAA

Product: anti sigma-E protein, RseA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDKLGQEWVSAAVDGETDAQTMAELSADTHSHDKWHNYHMIGDAMRGELPQNIVLDLSASIAAAIELEPAIVAPKHHASN
VAAPVTPQIAANAQQNRVVPLFKQFGQYAIAATVAMFAIVGVQNYNQSADDAASPSPVLITRPLIGSASPVSLQTGPVQQ
NQGYTNDQVNEQRRRINTYIQDHMLQQRLNTGAVVEDNTEVVPVPVNQ

Sequences:

>Translated_208_residues
MDKLGQEWVSAAVDGETDAQTMAELSADTHSHDKWHNYHMIGDAMRGELPQNIVLDLSASIAAAIELEPAIVAPKHHASN
VAAPVTPQIAANAQQNRVVPLFKQFGQYAIAATVAMFAIVGVQNYNQSADDAASPSPVLITRPLIGSASPVSLQTGPVQQ
NQGYTNDQVNEQRRRINTYIQDHMLQQRLNTGAVVEDNTEVVPVPVNQ
>Mature_208_residues
MDKLGQEWVSAAVDGETDAQTMAELSADTHSHDKWHNYHMIGDAMRGELPQNIVLDLSASIAAAIELEPAIVAPKHHASN
VAAPVTPQIAANAQQNRVVPLFKQFGQYAIAATVAMFAIVGVQNYNQSADDAASPSPVLITRPLIGSASPVSLQTGPVQQ
NQGYTNDQVNEQRRRINTYIQDHMLQQRLNTGAVVEDNTEVVPVPVNQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=194, Percent_Identity=37.6288659793814, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 22482; Mature: 22482

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLGQEWVSAAVDGETDAQTMAELSADTHSHDKWHNYHMIGDAMRGELPQNIVLDLSAS
CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHCCCCCCEEEECCCH
IAAAIELEPAIVAPKHHASNVAAPVTPQIAANAQQNRVVPLFKQFGQYAIAATVAMFAIV
HEEEEECCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVQNYNQSADDAASPSPVLITRPLIGSASPVSLQTGPVQQNQGYTNDQVNEQRRRINTYI
HHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH
QDHMLQQRLNTGAVVEDNTEVVPVPVNQ
HHHHHHHHHCCCCEEECCCCEEEECCCC
>Mature Secondary Structure
MDKLGQEWVSAAVDGETDAQTMAELSADTHSHDKWHNYHMIGDAMRGELPQNIVLDLSAS
CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHCCCCCCEEEECCCH
IAAAIELEPAIVAPKHHASNVAAPVTPQIAANAQQNRVVPLFKQFGQYAIAATVAMFAIV
HEEEEECCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVQNYNQSADDAASPSPVLITRPLIGSASPVSLQTGPVQQNQGYTNDQVNEQRRRINTYI
HHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHH
QDHMLQQRLNTGAVVEDNTEVVPVPVNQ
HHHHHHHHHCCCCEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]