| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172966
Identifier: 126172966
GI number: 126172966
Start: 811389
End: 812012
Strand: Direct
Name: 126172966
Synonym: Sbal_0718
Alternate gene names: NA
Gene position: 811389-812012 (Clockwise)
Preceding gene: 126172965
Following gene: 126172967
Centisome position: 15.82
GC content: 49.04
Gene sequence:
>624_bases ATGATGGATGAACCTCGATTATCCGCGGAGGAGCTTGCTTGTTTTAGCGAACTTTTTTCGCCGACTCGTGTGGGCACTGC CTTGACTAACGATCCCCTGGTCAATCACTTGCTCACAGTCACAACTGAAGTGCCGCAAGTTATCGCCTCGATTCTCGGTA AGGCCAAACTCACTCTATTAGCCGAAGTCGGGCCCTATAAACTCTGGTTTCCACTACTGATGAAAGTGGATGATTTTGGA CAGTTTCAACCTACTTTAGGCGTGCCTGAAGTGCTCGATGCTTCGGGAGTGGAGCGCAGTTGGCGGTTAACCCAAGCCGA TGATGTGTGGATATTCGACCACGATCAAGGTGAGCAATGGTCAGTTGCCTCGTTATCCAGTTCTGGCATGGCTATTCGCG CTAAATCGCAGCAGCAATTTAAACAATTGTTAGGCAGTAAAGATCTGCAATTACAACTGCCTAATGGCGAGACTATGCGC GTCGATATTGAGCCTATTCGTAGCGAGAAAGGTCTGGCCTTCGTTAAGTTTCAGGCTGAAACCGAAGAGCGCGAAGCGTT ACGTCAATTCTTATTTAGTCGTCACCGTAGCCAGCACGCTCAGCTCTACCGTGACTTACGTTAG
Upstream 100 bases:
>100_bases CTATATTCCGTTTTTTGCCACTGTTTTGGTGTAAAAATGTACAACCCCATACTTTGGTGGTACTTTTTGGGATAAGGAAT TTAACTTGGGAGGACTTATC
Downstream 100 bases:
>100_bases TACCTGCATTGCGACAGTTTTCGGCCTTGTGTTAGTTGGCCTGTTATCTAAAAATCTCAGTTCTGCAACTCGAATGTGAA ATCCACGGATTTAAAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MMDEPRLSAEELACFSELFSPTRVGTALTNDPLVNHLLTVTTEVPQVIASILGKAKLTLLAEVGPYKLWFPLLMKVDDFG QFQPTLGVPEVLDASGVERSWRLTQADDVWIFDHDQGEQWSVASLSSSGMAIRAKSQQQFKQLLGSKDLQLQLPNGETMR VDIEPIRSEKGLAFVKFQAETEEREALRQFLFSRHRSQHAQLYRDLR
Sequences:
>Translated_207_residues MMDEPRLSAEELACFSELFSPTRVGTALTNDPLVNHLLTVTTEVPQVIASILGKAKLTLLAEVGPYKLWFPLLMKVDDFG QFQPTLGVPEVLDASGVERSWRLTQADDVWIFDHDQGEQWSVASLSSSGMAIRAKSQQQFKQLLGSKDLQLQLPNGETMR VDIEPIRSEKGLAFVKFQAETEEREALRQFLFSRHRSQHAQLYRDLR >Mature_207_residues MMDEPRLSAEELACFSELFSPTRVGTALTNDPLVNHLLTVTTEVPQVIASILGKAKLTLLAEVGPYKLWFPLLMKVDDFG QFQPTLGVPEVLDASGVERSWRLTQADDVWIFDHDQGEQWSVASLSSSGMAIRAKSQQQFKQLLGSKDLQLQLPNGETMR VDIEPIRSEKGLAFVKFQAETEEREALRQFLFSRHRSQHAQLYRDLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23445; Mature: 23445
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDEPRLSAEELACFSELFSPTRVGTALTNDPLVNHLLTVTTEVPQVIASILGKAKLTLL CCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEE AEVGPYKLWFPLLMKVDDFGQFQPTLGVPEVLDASGVERSWRLTQADDVWIFDHDQGEQW ECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCEEEEECCCCCCE SVASLSSSGMAIRAKSQQQFKQLLGSKDLQLQLPNGETMRVDIEPIRSEKGLAFVKFQAE EEEEECCCCEEEEECCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEECC TEEREALRQFLFSRHRSQHAQLYRDLR CHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMDEPRLSAEELACFSELFSPTRVGTALTNDPLVNHLLTVTTEVPQVIASILGKAKLTLL CCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEE AEVGPYKLWFPLLMKVDDFGQFQPTLGVPEVLDASGVERSWRLTQADDVWIFDHDQGEQW ECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCEEEEECCCCCCE SVASLSSSGMAIRAKSQQQFKQLLGSKDLQLQLPNGETMRVDIEPIRSEKGLAFVKFQAE EEEEECCCCEEEEECCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEECC TEEREALRQFLFSRHRSQHAQLYRDLR CHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA