| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is thiE
Identifier: 125624044
GI number: 125624044
Start: 1185836
End: 1186492
Strand: Direct
Name: thiE
Synonym: llmg_1218
Alternate gene names: 125624044
Gene position: 1185836-1186492 (Clockwise)
Preceding gene: 125624043
Following gene: 125624045
Centisome position: 46.88
GC content: 37.44
Gene sequence:
>657_bases ATGACTAAGAAAACTTTAGATTTAAGTGTTTATTTTATTGCCGGATCACAAAATTTTTCAGAATGTTCACTAGATGAAGC AACGCAAAAGATTGCTTTAATTATAAAAAGTGGTGTCACTGTTTATCAATTTCGAGATAAGGGAACCATTTATAAAGAGC AGAAGCAGCGTCTGTCAATTGCTCAAAAATTACAAAAAGTGTCCGAAGAAGCAGGCGTTTCTTTTATTGTCAATGATGAT GTGGAGTTGGCGCGTGAACTAAATGCTGATGGAATTCATATTGGACAAACAGATGAGTCGGTCAGTAAAGTTCGCGAGAA GGTTGGTCAGGAAATGTGGTTGGGTCTTTCTGTCACTAATGCTGACGAATTAAAAACGGCACAAAGCAGTGGGGCTGATT ATTTAGGAATTGGGCCAATTTACCCAACAAACAGTAAAAATGATGCGGCAAAGCCAATTGGCATTAAAGACTTAAGACTG ATGCTTCTAGAAAATCAATTACCAATTGTAGGAATCGGTGGAATCACGCAAGATTCACTGACAGAATTGTCAGCAATTGG ACTTGACGGACTTGCGGTTATTTCTTTACTGACAGAAGCAGAAAATCCCAAAAAAGTTGCTCAAATGATTAGACAAAAAA TCACTAAAAACGGATGA
Upstream 100 bases:
>100_bases GAAATCATGCCTAATGCGAAAGCTTTTATTAGTGAGGCAATTTCTAAAACGATTATGGTGGGGCATGGTCATGGGCCATT GAATCATTGGGTGAATATTA
Downstream 100 bases:
>100_bases CGTACACTTAAAATTACTAAAAATAAATTGTTGCCGTTTTCTTTTCTAAACATGATTTAAACTTACAGAAATGTAAGTTT TTTTTTCGCTTAATAAATGT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTKKTLDLSVYFIAGSQNFSECSLDEATQKIALIIKSGVTVYQFRDKGTIYKEQKQRLSIAQKLQKVSEEAGVSFIVNDD VELARELNADGIHIGQTDESVSKVREKVGQEMWLGLSVTNADELKTAQSSGADYLGIGPIYPTNSKNDAAKPIGIKDLRL MLLENQLPIVGIGGITQDSLTELSAIGLDGLAVISLLTEAENPKKVAQMIRQKITKNG
Sequences:
>Translated_218_residues MTKKTLDLSVYFIAGSQNFSECSLDEATQKIALIIKSGVTVYQFRDKGTIYKEQKQRLSIAQKLQKVSEEAGVSFIVNDD VELARELNADGIHIGQTDESVSKVREKVGQEMWLGLSVTNADELKTAQSSGADYLGIGPIYPTNSKNDAAKPIGIKDLRL MLLENQLPIVGIGGITQDSLTELSAIGLDGLAVISLLTEAENPKKVAQMIRQKITKNG >Mature_217_residues TKKTLDLSVYFIAGSQNFSECSLDEATQKIALIIKSGVTVYQFRDKGTIYKEQKQRLSIAQKLQKVSEEAGVSFIVNDDV ELARELNADGIHIGQTDESVSKVREKVGQEMWLGLSVTNADELKTAQSSGADYLGIGPIYPTNSKNDAAKPIGIKDLRLM LLENQLPIVGIGGITQDSLTELSAIGLDGLAVISLLTEAENPKKVAQMIRQKITKNG
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=178, Percent_Identity=26.4044943820225, Blast_Score=61, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6325042, Length=233, Percent_Identity=29.1845493562232, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_LACLM (A2RKJ7)
Other databases:
- EMBL: AM406671 - RefSeq: YP_001032527.1 - ProteinModelPortal: A2RKJ7 - SMR: A2RKJ7 - STRING: A2RKJ7 - GeneID: 4797017 - GenomeReviews: AM406671_GR - KEGG: llm:llmg_1218 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: IMGSNNC - ProtClustDB: CLSK697654 - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 23698; Mature: 23567
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKTLDLSVYFIAGSQNFSECSLDEATQKIALIIKSGVTVYQFRDKGTIYKEQKQRLSI CCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH AQKLQKVSEEAGVSFIVNDDVELARELNADGIHIGQTDESVSKVREKVGQEMWLGLSVTN HHHHHHHHHHCCEEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHEEEEEECC ADELKTAQSSGADYLGIGPIYPTNSKNDAAKPIGIKDLRLMLLENQLPIVGIGGITQDSL HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHH TELSAIGLDGLAVISLLTEAENPKKVAQMIRQKITKNG HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TKKTLDLSVYFIAGSQNFSECSLDEATQKIALIIKSGVTVYQFRDKGTIYKEQKQRLSI CCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH AQKLQKVSEEAGVSFIVNDDVELARELNADGIHIGQTDESVSKVREKVGQEMWLGLSVTN HHHHHHHHHHCCEEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHEEEEEECC ADELKTAQSSGADYLGIGPIYPTNSKNDAAKPIGIKDLRLMLLENQLPIVGIGGITQDSL HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHH TELSAIGLDGLAVISLLTEAENPKKVAQMIRQKITKNG HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA