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The map label for this gene is 124486489

Identifier: 124486489

GI number: 124486489

Start: 1710242

End: 1710829

Strand: Reverse

Name: 124486489

Synonym: Mlab_1677

Alternate gene names: NA

Gene position: 1710829-1710242 (Counterclockwise)

Preceding gene: 124486491

Following gene: 124486488

Centisome position: 94.78

GC content: 54.76

Gene sequence:

>588_bases
ATGCCCTTATCCGTTCTTGCCATCACAACTTCACCGCGTCGTCACGGCAATACTGAATCCGCACTCGACACAGTGCTCGA
ATCGTTTTCCGGGATGTCGGTGGAAAAGGTCGTCCTAAACGACCTCAATATCGCGCCGTGCAAAGGCTGCGGAAAATGCG
AAAAGACCGGCGTATGTATCCATCAAGACGACTTCGCCGAACTCGGCGAAAAGATCCGTGCCTGCGATCTTCTGGTCTTC
GCATCCCCGGTGTATTCCATGTCGGTCTGTGCCCAGGCGAAGATCCTCATCGACCGGTGTCAGGTCTTCTGGTCGAGAAA
GTATGTCCTCCACGATCTGCCAAAGCCGGAGGGAAAAAAGTTCGCGATGTTTATCTCGGCTTCCGGTCAGACCCGCAAAG
GGATCTTCGATCACACCGTGCCTGTGGCCCAGTTCCTTTTCGACGTTTCCCAGATCCCGGCGTCACGGATCCGGTATCTC
CTTCTTCCGGGTCTCGACAAGATCAGTGATTTCCGGAAAAATCCCGAGATGATCGCCAAAGCAAAAGAGGCCGGGGACGC
GATGGCGGCACTGATGGTGGAAGAATGA

Upstream 100 bases:

>100_bases
TGAAGAGAGCTTTATATTACAGAATTTACGATTGGACAAATGCAGACTTCTCTCCCCTCATCACTGGATTTATCTGTGTC
CGGGGTGATATACTGAATAA

Downstream 100 bases:

>100_bases
CCACGATGCTCGTGATAAACGGAAGCCCGCGAAAACGCGGAAACACCGAGACGGTAATGAATGCCTTCGTGGAAGGCGCA
AAGGAAGCCGGTGCCGAGGT

Product: EIF-4a family ATP-dependent RNA helicase

Products: NA

Alternate protein names: AF-1; Af1; Isf-1 [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPLSVLAITTSPRRHGNTESALDTVLESFSGMSVEKVVLNDLNIAPCKGCGKCEKTGVCIHQDDFAELGEKIRACDLLVF
ASPVYSMSVCAQAKILIDRCQVFWSRKYVLHDLPKPEGKKFAMFISASGQTRKGIFDHTVPVAQFLFDVSQIPASRIRYL
LLPGLDKISDFRKNPEMIAKAKEAGDAMAALMVEE

Sequences:

>Translated_195_residues
MPLSVLAITTSPRRHGNTESALDTVLESFSGMSVEKVVLNDLNIAPCKGCGKCEKTGVCIHQDDFAELGEKIRACDLLVF
ASPVYSMSVCAQAKILIDRCQVFWSRKYVLHDLPKPEGKKFAMFISASGQTRKGIFDHTVPVAQFLFDVSQIPASRIRYL
LLPGLDKISDFRKNPEMIAKAKEAGDAMAALMVEE
>Mature_194_residues
PLSVLAITTSPRRHGNTESALDTVLESFSGMSVEKVVLNDLNIAPCKGCGKCEKTGVCIHQDDFAELGEKIRACDLLVFA
SPVYSMSVCAQAKILIDRCQVFWSRKYVLHDLPKPEGKKFAMFISASGQTRKGIFDHTVPVAQFLFDVSQIPASRIRYLL
LPGLDKISDFRKNPEMIAKAKEAGDAMAALMVEE

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 21483; Mature: 21352

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSVLAITTSPRRHGNTESALDTVLESFSGMSVEKVVLNDLNIAPCKGCGKCEKTGVCI
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEE
HQDDFAELGEKIRACDLLVFASPVYSMSVCAQAKILIDRCQVFWSRKYVLHDLPKPEGKK
ECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FAMFISASGQTRKGIFDHTVPVAQFLFDVSQIPASRIRYLLLPGLDKISDFRKNPEMIAK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCHHHHHH
AKEAGDAMAALMVEE
HHHHHHHHHHEEECC
>Mature Secondary Structure 
PLSVLAITTSPRRHGNTESALDTVLESFSGMSVEKVVLNDLNIAPCKGCGKCEKTGVCI
CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEE
HQDDFAELGEKIRACDLLVFASPVYSMSVCAQAKILIDRCQVFWSRKYVLHDLPKPEGKK
ECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
FAMFISASGQTRKGIFDHTVPVAQFLFDVSQIPASRIRYLLLPGLDKISDFRKNPEMIAK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCHHHHHH
AKEAGDAMAALMVEE
HHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]