Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486488

Identifier: 124486488

GI number: 124486488

Start: 1709643

End: 1710245

Strand: Reverse

Name: 124486488

Synonym: Mlab_1676

Alternate gene names: NA

Gene position: 1710245-1709643 (Counterclockwise)

Preceding gene: 124486489

Following gene: 124486485

Centisome position: 94.75

GC content: 53.57

Gene sequence:

>603_bases
ATGACCACGATGCTCGTGATAAACGGAAGCCCGCGAAAACGCGGAAACACCGAGACGGTAATGAATGCCTTCGTGGAAGG
CGCAAAGGAAGCCGGTGCCGAGGTGACGGTCATCCGTCTTGCGGATATCGATCACAAAAACTGCAAAGGGTGTAATTCCT
GTCACAAAAACGGGATATGCGTTATCAAAGACGCGCTGACGCCGGTCTTCGATCAGCTCATGGAAGTGGATATTCTGGTT
CTGGCGTCGCCGATCTACTCGATGTCGGTGACTGCCGAGATGAAGTCCTTCATCGACCGCGGGCAGTTTTTGTGGGCGCA
GAAGTTCGTGACGAAGACGCTTGTCTTCGACGAAGAGCATCTTTCAAAGCATACGGGCGTGTTTCTCGCGACTTCGGGAC
AGGATCTGCCGTACAGTTTCGATTCGGCGTTTCCGGTGGTCCGGGCGTTTTTCAATGATTCGGGTTTTACCTATACGGAG
AACGTGCTGTTCCCGGGCATGGATCTGCACGGCGGGGTGAAGGGCTGGCCGGAGAGCGTGGTCGAGGCAAAGAAGCGGGG
AAAAGAGATCGTAAAAAAGATGGATATGAAATTGAAGGCCTGA

Upstream 100 bases:

>100_bases
TTCCGGGTCTCGACAAGATCAGTGATTTCCGGAAAAATCCCGAGATGATCGCCAAAGCAAAAGAGGCCGGGGACGCGATG
GCGGCACTGATGGTGGAAGA

Downstream 100 bases:

>100_bases
CCCTTCACCTTTTTTATTTAGGAGTAGCGCGGTGTGGAAGCATGAGAAAAACCAACCGCGAATCTCCGCGAATTAACGCC
AATCGCATTTTCCTTACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: AF-3; Af3; Isf-3 [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTTMLVINGSPRKRGNTETVMNAFVEGAKEAGAEVTVIRLADIDHKNCKGCNSCHKNGICVIKDALTPVFDQLMEVDILV
LASPIYSMSVTAEMKSFIDRGQFLWAQKFVTKTLVFDEEHLSKHTGVFLATSGQDLPYSFDSAFPVVRAFFNDSGFTYTE
NVLFPGMDLHGGVKGWPESVVEAKKRGKEIVKKMDMKLKA

Sequences:

>Translated_200_residues
MTTMLVINGSPRKRGNTETVMNAFVEGAKEAGAEVTVIRLADIDHKNCKGCNSCHKNGICVIKDALTPVFDQLMEVDILV
LASPIYSMSVTAEMKSFIDRGQFLWAQKFVTKTLVFDEEHLSKHTGVFLATSGQDLPYSFDSAFPVVRAFFNDSGFTYTE
NVLFPGMDLHGGVKGWPESVVEAKKRGKEIVKKMDMKLKA
>Mature_199_residues
TTMLVINGSPRKRGNTETVMNAFVEGAKEAGAEVTVIRLADIDHKNCKGCNSCHKNGICVIKDALTPVFDQLMEVDILVL
ASPIYSMSVTAEMKSFIDRGQFLWAQKFVTKTLVFDEEHLSKHTGVFLATSGQDLPYSFDSAFPVVRAFFNDSGFTYTEN
VLFPGMDLHGGVKGWPESVVEAKKRGKEIVKKMDMKLKA

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 22148; Mature: 22017

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMLVINGSPRKRGNTETVMNAFVEGAKEAGAEVTVIRLADIDHKNCKGCNSCHKNGIC
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCCEE
VIKDALTPVFDQLMEVDILVLASPIYSMSVTAEMKSFIDRGQFLWAQKFVTKTLVFDEEH
EEHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LSKHTGVFLATSGQDLPYSFDSAFPVVRAFFNDSGFTYTENVLFPGMDLHGGVKGWPESV
HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCHHHH
VEAKKRGKEIVKKMDMKLKA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTMLVINGSPRKRGNTETVMNAFVEGAKEAGAEVTVIRLADIDHKNCKGCNSCHKNGIC
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCCEE
VIKDALTPVFDQLMEVDILVLASPIYSMSVTAEMKSFIDRGQFLWAQKFVTKTLVFDEEH
EEHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LSKHTGVFLATSGQDLPYSFDSAFPVVRAFFNDSGFTYTENVLFPGMDLHGGVKGWPESV
HHHHCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCHHHH
VEAKKRGKEIVKKMDMKLKA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]