| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486491
Identifier: 124486491
GI number: 124486491
Start: 1712676
End: 1713443
Strand: Reverse
Name: 124486491
Synonym: Mlab_1679
Alternate gene names: NA
Gene position: 1713443-1712676 (Counterclockwise)
Preceding gene: 124486496
Following gene: 124486489
Centisome position: 94.93
GC content: 54.04
Gene sequence:
>768_bases ATGACCTGGACCCCTCCCCTCTCCAAGCACCTGACCGACAGAAACATCAGCCTCTCTCCGTCAGGATTCCGGCTCTTCAT CCTGATATACTGGTTCATTCTTGGAATCGTCATCCTCGGGATGTGGACCCTCCTCTCCTACGACATACTCTCGATCGACG CCGTCTCCCTTTCGTCATCCGGCACCCCCGTCAAGGCCCTCTATCTCGCCTCCTTCTCTCATGAAATTCCGCAGCATCTC CTGACAAACGTTTTCACCTTCTTCATTCTGGGCGTTTCCCTGACGATCATCACTGTTCTCTTTCGAAAACTCGACAGCCG GTTTTACCTCTGCCCGTTCATCGCCTGCATCCTCTTTGTAACCATCCTCCCCTTCTCCTTCTCGACCGCCCTACTTCTCG TCCCGGGCCTTCAGCTGGTGGATATCGTCGGGTTCTCCGGCATCATATCTGCCGTGCTTGGGATGACTATCGTTACGATC GCCTATGCCGTCTGGAAAAATTTCGAAAGCCTCCGATTTTTCATCGGGACGATACTCATCTCGGCAGCGGTATTTCTCCT CATCCCGCTTGCAGAATTCAGAAACGCCGCCGCCGCCGTCCCCAATACCGCTCACCAGATCGGATTTCTCTACGGTGTCC TCATCACCTGGCTGATCGGCGCCGCCCTGATGACCGATTCAAAAAAGCGTGTGTATCTCTATCTTGCGGCACTTCTGGCG GCGCTTCTCCTGCCGATCATCATCTTCGGCATAACAGTTCTCTTGTAA
Upstream 100 bases:
>100_bases ACTATTCTCCATCACCCGGGAACGAAATAATACTTATCCCCCCGGAATTACCCCTTGCGTCACCCTTATCAGGCCGCATT CATAATTACTCATATCCCCC
Downstream 100 bases:
>100_bases ACGCCCCTCTCACTTCTTCTCTTCATGCACGTGAACGTGATGCATATCCGCCCCGTGGGGATGGTCATGCTCGAGACGTT CATGCGTATGCTCGTGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTWTPPLSKHLTDRNISLSPSGFRLFILIYWFILGIVILGMWTLLSYDILSIDAVSLSSSGTPVKALYLASFSHEIPQHL LTNVFTFFILGVSLTIITVLFRKLDSRFYLCPFIACILFVTILPFSFSTALLLVPGLQLVDIVGFSGIISAVLGMTIVTI AYAVWKNFESLRFFIGTILISAAVFLLIPLAEFRNAAAAVPNTAHQIGFLYGVLITWLIGAALMTDSKKRVYLYLAALLA ALLLPIIIFGITVLL
Sequences:
>Translated_255_residues MTWTPPLSKHLTDRNISLSPSGFRLFILIYWFILGIVILGMWTLLSYDILSIDAVSLSSSGTPVKALYLASFSHEIPQHL LTNVFTFFILGVSLTIITVLFRKLDSRFYLCPFIACILFVTILPFSFSTALLLVPGLQLVDIVGFSGIISAVLGMTIVTI AYAVWKNFESLRFFIGTILISAAVFLLIPLAEFRNAAAAVPNTAHQIGFLYGVLITWLIGAALMTDSKKRVYLYLAALLA ALLLPIIIFGITVLL >Mature_254_residues TWTPPLSKHLTDRNISLSPSGFRLFILIYWFILGIVILGMWTLLSYDILSIDAVSLSSSGTPVKALYLASFSHEIPQHLL TNVFTFFILGVSLTIITVLFRKLDSRFYLCPFIACILFVTILPFSFSTALLLVPGLQLVDIVGFSGIISAVLGMTIVTIA YAVWKNFESLRFFIGTILISAAVFLLIPLAEFRNAAAAVPNTAHQIGFLYGVLITWLIGAALMTDSKKRVYLYLAALLAA LLLPIIIFGITVLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28097; Mature: 27966
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWTPPLSKHLTDRNISLSPSGFRLFILIYWFILGIVILGMWTLLSYDILSIDAVSLSSS CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC GTPVKALYLASFSHEIPQHLLTNVFTFFILGVSLTIITVLFRKLDSRFYLCPFIACILFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH TILPFSFSTALLLVPGLQLVDIVGFSGIISAVLGMTIVTIAYAVWKNFESLRFFIGTILI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAVFLLIPLAEFRNAAAAVPNTAHQIGFLYGVLITWLIGAALMTDSKKRVYLYLAALLA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALLLPIIIFGITVLL HHHHHHHHHHHHHHC >Mature Secondary Structure TWTPPLSKHLTDRNISLSPSGFRLFILIYWFILGIVILGMWTLLSYDILSIDAVSLSSS CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC GTPVKALYLASFSHEIPQHLLTNVFTFFILGVSLTIITVLFRKLDSRFYLCPFIACILFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH TILPFSFSTALLLVPGLQLVDIVGFSGIISAVLGMTIVTIAYAVWKNFESLRFFIGTILI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAVFLLIPLAEFRNAAAAVPNTAHQIGFLYGVLITWLIGAALMTDSKKRVYLYLAALLA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALLLPIIIFGITVLL HHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA