Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124486284

Identifier: 124486284

GI number: 124486284

Start: 1506469

End: 1508040

Strand: Reverse

Name: 124486284

Synonym: Mlab_1468

Alternate gene names: NA

Gene position: 1508040-1506469 (Counterclockwise)

Preceding gene: 124486285

Following gene: 124486283

Centisome position: 83.55

GC content: 48.09

Gene sequence:

>1572_bases
ATGAAAAATGAATTCGGTGTTTCCAGTGTTGTCGGTGTTGTTCTTCTCTTGCTTCTGGTTGTTCTCGCAGCTTCCGTTAT
CGGTCTGACCCTTTCGGCAGCTACGCAAAACGCTGTTGAAAGTACGCCGAATGTTCAGTTTATCCCTTCGGTTGATCCCC
AGATGCTGTATCACGGCGGTGGTGATGTTCTGTACAAGGATCGATTGAAATTATATGCTAACGGCGTTGATATAACAGAC
ACCGTCAGTATTGATTCCATGACTACCTGGACCGAGTGGCGTACTGGTCAGGCGATCGAACTGCCTGATGACTATTATGT
TGCAAACCTTACGATCATCGCTCTAGATACGTTGGGCCGTGACCAGTTGTTGTATCGGGGTTCGGGCGTTGCCGTGACAC
CTTTGCCGACGCCCACCACAACCTCCACACCAACGGTAACTCCGACACCCACTCCGACAACTCCTACTCCAACGGTAACG
CCCACGCCGACTCCGGAACCAACTCCCAACCCGTATTATACCGTCGGCAGCGATCATGCTGATGGGTTTGCGACGGTTGG
GGAGTTGGTTGAGTCGCTCAACAACTGGTCGAACGCATTGTACGGGGCGGATGTGGCCTTGACTTATGGCGGCAATCAGA
TCGGTTTCTTTGGTGCTGTCCCGATTGGGCGTGAACCGATTCTTATAACGGAGGGGATGGGGACGGTCACCCTAATTACT
TATGGTGGGACGGGTACTCTTACAGAGGTACCGTTTACCCGCGCTCCTGGGTATGAGGGAGAGCTTCTTGTGATATCCTC
AGATGCTGAGCTGGTAACAGCCGGGGCCAATCTCAAGCTTGATGGAATGGGTCATGGGGCTGCCCCTCTTCTTTCAGTAA
CCTCCAGCGGGTCTCTGGATGTGCATGGCCATATTACACTGATAAATAATACCAACCCGGCAGGGAATGGAGGTGCCCTT
CATAATGAAGGTTCGGTTTATGTTAGCACAGGACTGATAATCTATAATAATACTGCAAATAATGGCGGCGGTATATATAA
TATTGGTGCGATCACACTATCTTCAGATAATATTATCAGAGATAATGTTGCCTTGGAAAAAGGCGGCGGTATTTATAATG
CTGGCTTGAGCGGCGTGTCGATTAAAGGTCCAATAACAAATAACTCTGCAAAATATGGCGGTGGTATTTATAATGACGGG
ACCATGACGACAACCGGTACTATCTCAGGAAATTCCGCATCAATATCCGGCGGGGGGGTGTACAATGCAGGTACCTATAC
ATTTTCCTGGACATCTACGGTTTCTGATAATCAGGCTCAATATGGCGGTGGTATCTATAATGAAGGAACCATCCCCTTTT
TTGGGGGAGCTATATCCGGGAATACCGCTACGATAAATGGTGGAGGACTCTTTAATTCAGGAAGCTATACTATGGGTGGG
AACTCTATTGCCGGGAATACAGCGGGGAATATTGGAAACCAGGTGTATGCAACCATTGATTCAACAAATTCCATTCCCAC
TTGGATAATTACTCTTAAGAAGCATGGGAATTCTTATTATTATGCGGATTAA

Upstream 100 bases:

>100_bases
CGATAACAGCTACTCTGCAAATAACTCCGCCGCCGGGAGGGGTGATTTATCTTACGGTCATCAAGCCAGTCTATGATGTC
GATGTCAGGAGATATTAGAT

Downstream 100 bases:

>100_bases
TAATCCCCTTCCCTCTATCGAGTATGAAAATATCTCTTCCATGAACCAGCTCTGAGATATTTTGAAGCCGCACTTCTCGA
ATGCCTGAGGTCTGCCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD
TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT
PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT
YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL
HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG
TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG
NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD

Sequences:

>Translated_523_residues
MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD
TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT
PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT
YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL
HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG
TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG
NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD
>Mature_523_residues
MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD
TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT
PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT
YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL
HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG
TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG
NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53843; Mature: 53843

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECCCCCEEEEECC
GDVLYKDRLKLYANGVDITDTVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGR
CCEEEECCEEEEECCCCCEEEEEECCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCC
DQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVTPTPTPEPTPNPYYTVGSDHA
CEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
DGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT
CHHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEE
YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLD
ECCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCEE
VHGHITLINNTNPAGNGGALHNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIR
EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEE
DNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDGTMTTTGTISGNSASISGGGV
CCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCEECCCCE
YNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG
ECCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEECCEECCCEEEEECCCEECCCCEEECC
NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECC
>Mature Secondary Structure
MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECCCCCEEEEECC
GDVLYKDRLKLYANGVDITDTVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGR
CCEEEECCEEEEECCCCCEEEEEECCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCC
DQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVTPTPTPEPTPNPYYTVGSDHA
CEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
DGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT
CHHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEE
YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLD
ECCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCEE
VHGHITLINNTNPAGNGGALHNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIR
EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEE
DNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDGTMTTTGTISGNSASISGGGV
CCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCEECCCCE
YNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG
ECCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEECCEECCCEEEEECCCEECCCCEEECC
NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA