| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486284
Identifier: 124486284
GI number: 124486284
Start: 1506469
End: 1508040
Strand: Reverse
Name: 124486284
Synonym: Mlab_1468
Alternate gene names: NA
Gene position: 1508040-1506469 (Counterclockwise)
Preceding gene: 124486285
Following gene: 124486283
Centisome position: 83.55
GC content: 48.09
Gene sequence:
>1572_bases ATGAAAAATGAATTCGGTGTTTCCAGTGTTGTCGGTGTTGTTCTTCTCTTGCTTCTGGTTGTTCTCGCAGCTTCCGTTAT CGGTCTGACCCTTTCGGCAGCTACGCAAAACGCTGTTGAAAGTACGCCGAATGTTCAGTTTATCCCTTCGGTTGATCCCC AGATGCTGTATCACGGCGGTGGTGATGTTCTGTACAAGGATCGATTGAAATTATATGCTAACGGCGTTGATATAACAGAC ACCGTCAGTATTGATTCCATGACTACCTGGACCGAGTGGCGTACTGGTCAGGCGATCGAACTGCCTGATGACTATTATGT TGCAAACCTTACGATCATCGCTCTAGATACGTTGGGCCGTGACCAGTTGTTGTATCGGGGTTCGGGCGTTGCCGTGACAC CTTTGCCGACGCCCACCACAACCTCCACACCAACGGTAACTCCGACACCCACTCCGACAACTCCTACTCCAACGGTAACG CCCACGCCGACTCCGGAACCAACTCCCAACCCGTATTATACCGTCGGCAGCGATCATGCTGATGGGTTTGCGACGGTTGG GGAGTTGGTTGAGTCGCTCAACAACTGGTCGAACGCATTGTACGGGGCGGATGTGGCCTTGACTTATGGCGGCAATCAGA TCGGTTTCTTTGGTGCTGTCCCGATTGGGCGTGAACCGATTCTTATAACGGAGGGGATGGGGACGGTCACCCTAATTACT TATGGTGGGACGGGTACTCTTACAGAGGTACCGTTTACCCGCGCTCCTGGGTATGAGGGAGAGCTTCTTGTGATATCCTC AGATGCTGAGCTGGTAACAGCCGGGGCCAATCTCAAGCTTGATGGAATGGGTCATGGGGCTGCCCCTCTTCTTTCAGTAA CCTCCAGCGGGTCTCTGGATGTGCATGGCCATATTACACTGATAAATAATACCAACCCGGCAGGGAATGGAGGTGCCCTT CATAATGAAGGTTCGGTTTATGTTAGCACAGGACTGATAATCTATAATAATACTGCAAATAATGGCGGCGGTATATATAA TATTGGTGCGATCACACTATCTTCAGATAATATTATCAGAGATAATGTTGCCTTGGAAAAAGGCGGCGGTATTTATAATG CTGGCTTGAGCGGCGTGTCGATTAAAGGTCCAATAACAAATAACTCTGCAAAATATGGCGGTGGTATTTATAATGACGGG ACCATGACGACAACCGGTACTATCTCAGGAAATTCCGCATCAATATCCGGCGGGGGGGTGTACAATGCAGGTACCTATAC ATTTTCCTGGACATCTACGGTTTCTGATAATCAGGCTCAATATGGCGGTGGTATCTATAATGAAGGAACCATCCCCTTTT TTGGGGGAGCTATATCCGGGAATACCGCTACGATAAATGGTGGAGGACTCTTTAATTCAGGAAGCTATACTATGGGTGGG AACTCTATTGCCGGGAATACAGCGGGGAATATTGGAAACCAGGTGTATGCAACCATTGATTCAACAAATTCCATTCCCAC TTGGATAATTACTCTTAAGAAGCATGGGAATTCTTATTATTATGCGGATTAA
Upstream 100 bases:
>100_bases CGATAACAGCTACTCTGCAAATAACTCCGCCGCCGGGAGGGGTGATTTATCTTACGGTCATCAAGCCAGTCTATGATGTC GATGTCAGGAGATATTAGAT
Downstream 100 bases:
>100_bases TAATCCCCTTCCCTCTATCGAGTATGAAAATATCTCTTCCATGAACCAGCTCTGAGATATTTTGAAGCCGCACTTCTCGA ATGCCTGAGGTCTGCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD
Sequences:
>Translated_523_residues MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD >Mature_523_residues MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGGGDVLYKDRLKLYANGVDITD TVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGRDQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVT PTPTPEPTPNPYYTVGSDHADGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLDVHGHITLINNTNPAGNGGAL HNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIRDNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDG TMTTTGTISGNSASISGGGVYNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53843; Mature: 53843
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECCCCCEEEEECC GDVLYKDRLKLYANGVDITDTVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGR CCEEEECCEEEEECCCCCEEEEEECCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCC DQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVTPTPTPEPTPNPYYTVGSDHA CEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC DGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT CHHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEE YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLD ECCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCEE VHGHITLINNTNPAGNGGALHNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIR EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEE DNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDGTMTTTGTISGNSASISGGGV CCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCEECCCCE YNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG ECCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEECCEECCCEEEEECCCEECCCCEEECC NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECC >Mature Secondary Structure MKNEFGVSSVVGVVLLLLLVVLAASVIGLTLSAATQNAVESTPNVQFIPSVDPQMLYHGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEECCCCCEEEEECC GDVLYKDRLKLYANGVDITDTVSIDSMTTWTEWRTGQAIELPDDYYVANLTIIALDTLGR CCEEEECCEEEEECCCCCEEEEEECCEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCC DQLLYRGSGVAVTPLPTPTTTSTPTVTPTPTPTTPTPTVTPTPTPEPTPNPYYTVGSDHA CEEEEECCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC DGFATVGELVESLNNWSNALYGADVALTYGGNQIGFFGAVPIGREPILITEGMGTVTLIT CHHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEE YGGTGTLTEVPFTRAPGYEGELLVISSDAELVTAGANLKLDGMGHGAAPLLSVTSSGSLD ECCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCEE VHGHITLINNTNPAGNGGALHNEGSVYVSTGLIIYNNTANNGGGIYNIGAITLSSDNIIR EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEE DNVALEKGGGIYNAGLSGVSIKGPITNNSAKYGGGIYNDGTMTTTGTISGNSASISGGGV CCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCEECCCCE YNAGTYTFSWTSTVSDNQAQYGGGIYNEGTIPFFGGAISGNTATINGGGLFNSGSYTMGG ECCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEECCEECCCEEEEECCCEECCCCEEECC NSIAGNTAGNIGNQVYATIDSTNSIPTWIITLKKHGNSYYYAD CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA