Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486283

Identifier: 124486283

GI number: 124486283

Start: 1504859

End: 1506151

Strand: Reverse

Name: 124486283

Synonym: Mlab_1467

Alternate gene names: NA

Gene position: 1506151-1504859 (Counterclockwise)

Preceding gene: 124486284

Following gene: 124486282

Centisome position: 83.45

GC content: 47.18

Gene sequence:

>1293_bases
ATGCCCAATAACTCAGGAGTATCCAGTGTTATTGGAGTCGTTATTCTCTTGCTTCTGGTCGTTCTCGCAGCTTCTGTAAT
CGGTCTGACCCTCTCGAAAGCCACCCAGAACGCTGTTGACAGTACGCCGAATGTGCAGTTTATACTGTCAGCTGATTCTC
AGATGCTGTATCACGGCGGCGGGGATGTTCTGTATAAGGATCGATTAACGTTTTATGATAACGGTGATGATATCACCAAT
GCGATCCAAATAGATTCTGATGATACGTGGACTGAGTGGCGAACAGGTCAGGCGATTACACTACCTTGGGATTGTGTTGT
TACAAATCTAACCATCTTGTCCTTAGATACTCTTGGTCGAGAACAGTTGTTGTATCGGGGTTCAGGTCTCGTGGTCCCTA
CTCCCACTGAATCTCCTACTGAAACTCCCACTCCCACACTAACGCCGACCCCCACTCCTACTCTGACCCCAACCCCAACC
CCCACACCCACTCCGACACCGTCCGGTTTGCCCGATGCAACATTTACGTGGGAGGTAGACTTTGGTTCTGAGGTCCCGCA
TTCAAGTCTTCCGTCCTGGCTCACTGCTGATGCGTATGTCATTACTGATGAGGGATGGATATGGTGGCCTTGGTGGTGGG
ATCGGTATACTGATGTTGAGTTTACTGCAGTCGAGAATGGCGCCGATGTTACCTATTTCTGGTCATCAATCGGAGTTGAT
GTTTCAGATCCTTATGACAGGGTTACAGAAATGCGGTTTGACGATACAGGATTGTATCCCGTCACGCTGACCGTGACAAA
TAGTTCCGGCACGAATAGTTCTACGAAGACGTTCAGCGTAAGAAATCCGGGAGTTACCGCGATGACGTGGGTTAAAAGCG
ATAGAACCTCTCGTACCGGTGTGTTTGGAAGCAATGCGAGCTTGGGCTCGTATCAATGGAGGTTATTGATTCCCTCGAGC
ATACAAGGATATAGTATGCAGATATATACGGATGATTGGTGGGGTTCTGAGACCGTCTATTCATATGTTCGCATTCCAAA
GAAAAATACCTGGTATCACGTTGCCGGAACATACGAAGAGAATGATGCGTCGGATAATCTCATAATTTATTTTAATGGAG
AGAAAGAAATGGGCGAGGGTGCTTCCGGTACATTATTGGATGTCAATGGAGTAACTACATGGAGTGAAACCAACCGCTTT
TACTGTGATGCCTCGTATGAAATCCCGTTTGCACTTACATCAGCGGAGATCGCTACAGTTTATGATGATGAAAAATCTGC
TTATGGGTGGTAG

Upstream 100 bases:

>100_bases
CTAACAGAAGCCAGTATGGAAATAACTCCGCTGTCAGATGAGCAGATATATTGTACTATCATCACGCCAATGTGTGGTGT
TGATGACAGGTGGTGCTGAT

Downstream 100 bases:

>100_bases
TTTCTGCTATCTGTATTACGGGGTAATGTAACATATTTTCCAAGATACTTGGGCGTTTGTTTTTTAAGGGGAAATAGTGT
GGACTATATTTGACTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITN
AIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPT
PTPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD
VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSS
IQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRF
YCDASYEIPFALTSAEIATVYDDEKSAYGW

Sequences:

>Translated_430_residues
MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITN
AIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPT
PTPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD
VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSS
IQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRF
YCDASYEIPFALTSAEIATVYDDEKSAYGW
>Mature_429_residues
PNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITNA
IQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTP
TPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVDV
SDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSSI
QGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFY
CDASYEIPFALTSAEIATVYDDEKSAYGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47552; Mature: 47421

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECC
GDVLYKDRLTFYDNGDDITNAIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGR
CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHEEEEEEECCCCC
EQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTPTPTPTPSGLPDATFTWEVD
HHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
FGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD
CCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCC
VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTG
CCCCHHHHHHEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCE
VFGSNASLGSYQWRLLIPSSIQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEE
EECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC
NDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFYCDASYEIPFALTSAEIATV
CCCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCCCEEEEEECCCCCEEEECCEEEEE
YDDEKSAYGW
EECCCCCCCC
>Mature Secondary Structure 
PNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECC
GDVLYKDRLTFYDNGDDITNAIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGR
CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHEEEEEEECCCCC
EQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTPTPTPTPSGLPDATFTWEVD
HHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
FGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD
CCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCC
VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTG
CCCCHHHHHHEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCE
VFGSNASLGSYQWRLLIPSSIQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEE
EECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC
NDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFYCDASYEIPFALTSAEIATV
CCCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCCCEEEEEECCCCCEEEECCEEEEE
YDDEKSAYGW
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA