Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486285

Identifier: 124486285

GI number: 124486285

Start: 1508043

End: 1508861

Strand: Reverse

Name: 124486285

Synonym: Mlab_1469

Alternate gene names: NA

Gene position: 1508861-1508043 (Counterclockwise)

Preceding gene: 124486286

Following gene: 124486284

Centisome position: 83.6

GC content: 47.86

Gene sequence:

>819_bases
GTGATGATGGCCACAAAAAATGATTCCGGTCTTTCCATGGCGGTTGGTTTTGTGATGGTCTTATTGGTCATCGCGATGAT
CATCGGGATGTGGGCGGTCATCGGCGTGCCTGAGCAGATCAGGGATGCGGAGGATTATCATGCTATTGAGGTGACGAATT
CTTTCCTTGACTACAAAATTGCTGTTGATAATCAGCGTGTTCATGACATGACCGGATTGAACATCAGTATGCTGATTCCT
GCCGCATCTGCCTATGCCGACGGGGCCCTCTTTATGGAGGAGGATGTGGGGACTCTCCGTATTCTGCTTGGCAGCACCGA
AAATACATATGATATCAGCAGGTTGTATACAACATTTGGGACGACGAATACCCGGGTCGGTTACGAAGGGGGCGGCGTAT
TTCGAAACGATTACGGCTCCGCTGTGTGGGTGACACCGCCATCAATCAATATAGATAAAGACGGGTCTGATCTTGATATC
ACAATGATAGTTCCGGAAATGCATGGTGTTTTTGCTGTTGGAAGTTCCGAAGGAATTCCGGTGGAGACAGGTCTTGTCTC
TTCTATCTCAACCTATGTGAATGCGCCGCAGGATCAGATGCTCACTATAACTTATACCGCTGAAAAGCAGTGGGATGCTG
TCCTTTGGAGCACCTTTTTCAACGAAACACAGATACTATATCAGAGCGAAGGTGTATCTATCACAAGTACGATGCCGTCA
CCGATAACAGCTACTCTGCAAATAACTCCGCCGCCGGGAGGGGTGATTTATCTTACGGTCATCAAGCCAGTCTATGATGT
CGATGTCAGGAGATATTAG

Upstream 100 bases:

>100_bases
CTGGTGTTGCCACGTTGAATTACCGGCTGAAAGAAATCATCGATCCGACCCCGGGTTCTTCAGATGTAGATCATTTATGC
GTATTTACTATGGGGTTGCA

Downstream 100 bases:

>100_bases
ATATGAAAAATGAATTCGGTGTTTCCAGTGTTGTCGGTGTTGTTCTTCTCTTGCTTCTGGTTGTTCTCGCAGCTTCCGTT
ATCGGTCTGACCCTTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP
AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI
TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS
PITATLQITPPPGGVIYLTVIKPVYDVDVRRY

Sequences:

>Translated_272_residues
MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP
AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI
TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS
PITATLQITPPPGGVIYLTVIKPVYDVDVRRY
>Mature_272_residues
MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP
AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI
TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS
PITATLQITPPPGGVIYLTVIKPVYDVDVRRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29713; Mature: 29713

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKI
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCEEEEEE
AVDNQRVHDMTGLNISMLIPAASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFG
EECCCEEEHCCCCEEEEEEECCHHCCCCEEEEECCCCEEEEEEECCCCCEEHHHEEEECC
TTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDITMIVPEMHGVFAVGSSEGIP
CCCCEEEECCCCEEECCCCCEEEEECCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCE
VETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS
ECCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEECCCC
PITATLQITPPPGGVIYLTVIKPVYDVDVRRY
CEEEEEEEECCCCCEEEEEEECCEECCCEECC
>Mature Secondary Structure
MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKI
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCEEEEEE
AVDNQRVHDMTGLNISMLIPAASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFG
EECCCEEEHCCCCEEEEEEECCHHCCCCEEEEECCCCEEEEEEECCCCCEEHHHEEEECC
TTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDITMIVPEMHGVFAVGSSEGIP
CCCCEEEECCCCEEECCCCCEEEEECCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCE
VETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS
ECCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEECCCC
PITATLQITPPPGGVIYLTVIKPVYDVDVRRY
CEEEEEEEECCCCCEEEEEEECCEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA