Click here to switch to the map view.

The map label for this gene is 124486129

Identifier: 124486129

GI number: 124486129

Start: 1335847

End: 1336842

Strand: Reverse

Name: 124486129

Synonym: Mlab_1311

Alternate gene names: NA

Gene position: 1336842-1335847 (Counterclockwise)

Preceding gene: 124486131

Following gene: 124486126

Centisome position: 74.06

GC content: 51.1

Gene sequence:

>996_bases
ATGTTTTCCGAATCGTTCATCACCTTTCAACACAAACTGATTTATCAGTACATGGGATTGTTCGACAGGTTTAAAAAACA
GGAGAATGCCGCTTCAAAAGAAGCCTCAAAAGAAGCAGACTCTGCGATGTGGTTCTCTCAGGCCGAGTCATATATCAGAC
TCGAACGATATACCGATGCTCTTCACTGTCTTGATAAAGCGATCGCCTGCGATAAGGAGAACCCGCTCGCCTGGCACGAG
AAGGGCCGCCTCCTTGCTATGGTCAATGAAGAGAAGGCTTCGATACCCTGTTACGACCGGGCGATCGAACTCCGCCCGGA
CTCGGCGGTGTATTGCCATAATAAAGGGGATGCCCTTGCGACGTTTCACCGGTATGACGAGGCGGATGCCTGCTTTCTAA
AGGCGCTTTCTCTCGCTCCCGACGACGTGGTGTTTCTTACCAGCCATGCACGGATGCTGTCGATCGCGAAAAAATTCAGC
GAGGCCGACAAAGTCATGGCACATGTCTGCGATCTGGAACCCCGCGGTCCGGAACACTGGTTCAACCGTGCCACGATGCT
GTATGACTGCGGGAAGCTCGAGGATGCGGTCACCTGCTATAAGGCAGCCTTTACGATCGCTCCGGGTCATTCGGTCAGTT
ACTTCAACTGCGGCAATGCTCTGTCTTCCTTGGGAAAACATGAGGAGTCGCTCTTTTACTACGACAAGGCTCTGAAATAC
GAACGCTCGATGACCGGGGCTATGAACAACAAAGGAATGGCGCTCAGCATCCTTGGAAGACATGAGGAAGCGTATGACTG
TTTCCGCCGGGTTTTGATCGCTCTTCCAAACGACGCGGATGCCTGGTACAACAAAGGATACGAACAGATGCTTCTTGGAA
AATATGCGGATTCGATCGAGTCTTTCGACAAGGCGCTCTCGTTTGCGAATGGAAATAACCGTGAGCTGATCAATAAATGC
CGGGAAGCCAAAGAAAAGGCATCTCGGTCAATGTAA

Upstream 100 bases:

>100_bases
GAGATAGGTGATGAACTCGGATAGAGAGGAGGGTATCATTGACTAACACTTTAGAGGGTTTGTTATAAGCATTTTACGGT
ACCTGCGGATTTTTTCCCTC

Downstream 100 bases:

>100_bases
AAAAAATAAAAAAAATCTTTTTTAAGTAGGACTTACGCGGTAGGCTTTCTCATGCTTCCACACCCAGCCATATACTTCCC
GAATTATATCCTCACAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFSESFITFQHKLIYQYMGLFDRFKKQENAASKEASKEADSAMWFSQAESYIRLERYTDALHCLDKAIACDKENPLAWHE
KGRLLAMVNEEKASIPCYDRAIELRPDSAVYCHNKGDALATFHRYDEADACFLKALSLAPDDVVFLTSHARMLSIAKKFS
EADKVMAHVCDLEPRGPEHWFNRATMLYDCGKLEDAVTCYKAAFTIAPGHSVSYFNCGNALSSLGKHEESLFYYDKALKY
ERSMTGAMNNKGMALSILGRHEEAYDCFRRVLIALPNDADAWYNKGYEQMLLGKYADSIESFDKALSFANGNNRELINKC
REAKEKASRSM

Sequences:

>Translated_331_residues
MFSESFITFQHKLIYQYMGLFDRFKKQENAASKEASKEADSAMWFSQAESYIRLERYTDALHCLDKAIACDKENPLAWHE
KGRLLAMVNEEKASIPCYDRAIELRPDSAVYCHNKGDALATFHRYDEADACFLKALSLAPDDVVFLTSHARMLSIAKKFS
EADKVMAHVCDLEPRGPEHWFNRATMLYDCGKLEDAVTCYKAAFTIAPGHSVSYFNCGNALSSLGKHEESLFYYDKALKY
ERSMTGAMNNKGMALSILGRHEEAYDCFRRVLIALPNDADAWYNKGYEQMLLGKYADSIESFDKALSFANGNNRELINKC
REAKEKASRSM
>Mature_331_residues
MFSESFITFQHKLIYQYMGLFDRFKKQENAASKEASKEADSAMWFSQAESYIRLERYTDALHCLDKAIACDKENPLAWHE
KGRLLAMVNEEKASIPCYDRAIELRPDSAVYCHNKGDALATFHRYDEADACFLKALSLAPDDVVFLTSHARMLSIAKKFS
EADKVMAHVCDLEPRGPEHWFNRATMLYDCGKLEDAVTCYKAAFTIAPGHSVSYFNCGNALSSLGKHEESLFYYDKALKY
ERSMTGAMNNKGMALSILGRHEEAYDCFRRVLIALPNDADAWYNKGYEQMLLGKYADSIESFDKALSFANGNNRELINKC
REAKEKASRSM

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=217, Percent_Identity=27.6497695852535, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32307150, Length=217, Percent_Identity=27.6497695852535, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=289, Percent_Identity=22.4913494809689, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=289, Percent_Identity=22.4913494809689, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319387, Length=248, Percent_Identity=22.5806451612903, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17647755, Length=255, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24585827, Length=255, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24585829, Length=255, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 37677; Mature: 37677

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSESFITFQHKLIYQYMGLFDRFKKQENAASKEASKEADSAMWFSQAESYIRLERYTDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHCLDKAIACDKENPLAWHEKGRLLAMVNEEKASIPCYDRAIELRPDSAVYCHNKGDALA
HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCEEEECCCCEEEEECCCCEEH
TFHRYDEADACFLKALSLAPDDVVFLTSHARMLSIAKKFSEADKVMAHVCDLEPRGPEHW
HHHHCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FNRATMLYDCGKLEDAVTCYKAAFTIAPGHSVSYFNCGNALSSLGKHEESLFYYDKALKY
HCCHHHEEECCCHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHH
ERSMTGAMNNKGMALSILGRHEEAYDCFRRVLIALPNDADAWYNKGYEQMLLGKYADSIE
HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH
SFDKALSFANGNNRELINKCREAKEKASRSM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSESFITFQHKLIYQYMGLFDRFKKQENAASKEASKEADSAMWFSQAESYIRLERYTDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHCLDKAIACDKENPLAWHEKGRLLAMVNEEKASIPCYDRAIELRPDSAVYCHNKGDALA
HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCEEEECCCCEEEEECCCCEEH
TFHRYDEADACFLKALSLAPDDVVFLTSHARMLSIAKKFSEADKVMAHVCDLEPRGPEHW
HHHHCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FNRATMLYDCGKLEDAVTCYKAAFTIAPGHSVSYFNCGNALSSLGKHEESLFYYDKALKY
HCCHHHEEECCCHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHH
ERSMTGAMNNKGMALSILGRHEEAYDCFRRVLIALPNDADAWYNKGYEQMLLGKYADSIE
HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH
SFDKALSFANGNNRELINKCREAKEKASRSM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]