| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486131
Identifier: 124486131
GI number: 124486131
Start: 1338491
End: 1339576
Strand: Reverse
Name: 124486131
Synonym: Mlab_1313
Alternate gene names: NA
Gene position: 1339576-1338491 (Counterclockwise)
Preceding gene: 124486132
Following gene: 124486129
Centisome position: 74.22
GC content: 55.8
Gene sequence:
>1086_bases ATGAAAAAATCTGCCTTCGATGACTTAGTCGCTGCTGTCAGGAGTGATGACAGCGCAAGGCAGGAGTCTGCGGCGAACAA GATCTGTTCATTGAACGATCCTGTTTCACTCTCTCATATTTTGTCCGTCCTCAAAGAGGATGATCCTCTGACCCAGCGCG TTATGCTCTGGGCGCTGCGGAATTATTCGGCAGATCTTGATTACGCGCAGTATCTTTCGTATCTTTCCTCCGAGGATCTC GGGGTCCGCGAAGCCGCGCTTATGCTCTTTATCGACGGAGGCCAGTCGGCAGTCGACACGCTGGTTACCGGCGTTTCTTC TCCGCATATGGCGATTCAGTATGCGTCTGTCCAGGCCCTTGGCCAATTTCGGGCTCCGGCAGCGATCCCTGCGCTGATCT CTGCTGCCTCGTCATCCGAACAGGATATCCGGGAGATCGCCGTGATGTCTCTTGGGGTTTATCACGATCAGATGATCGTT CCAACGCTCATCTCTGCGTTGTCGGATCTTCCTGAGATCAGGCTGGCGGCTCTCTCCGGTCTTCGCGGCCGGCAGCTGAC CCGGGATGAGCTTTCGGCCGTTTTGAACGTTCTGACCGATGAATGCGAGGATATTCGCGCCGCCGCCGTGTATGTTCTGG ATGCGCTGACTCCGGGCTCGCTCACCGCCGATTCTTCGCCGTATGTCAGGCGGGCCCTTGCTTCGGTGACCGCCGAGGTC CCTGTTCTTACCGAATTATGCTGTGACTCCGATCACTCGGTGAGATCGGCAGCGGCCGAATCGGTCCGAAAGCAGAAACT CAATCTGGAAGACACGCTTCTTCCGCTTCTTTCGGATTCGGTTCCGGGTGTTCGCCGGGCCGCTGCGTCTGCTCTCGGCA ACTCAACAAGGCCTGATGTGGTCCCTGCTTTGATTGCCTGCCTTTCCGATCCAAAACCCGGGATCCGTGCCGCCGCTGCA GCTTCGCTTGGAAATATCGGCGGCGAGCCGGTGATTTTAGCACTGAAAGAGGCGGCAAATACCAATAATCCGATCCTTGC AGGGATCATTAAAAACGCTTTGACTACCGCGGAAGGAAAAAAATAA
Upstream 100 bases:
>100_bases CGCCTGTTTCAAGGCAAAAGCCGGCGATGTTGTGGGCCCGGTCAAAACCCAGTTCGGCTGGCATATCATCAAAGTAACCG ATATTAAGAACTGATCCTCT
Downstream 100 bases:
>100_bases TCACTCGACCGCAGTTCTCACTGCGATCTCTGTTTCCATTCTTTTGACTTCGTTTTCCACATCTTCTATCTCGATCATCT TGACGCGTTTTTCCATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK
Sequences:
>Translated_361_residues MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK >Mature_361_residues MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38015; Mature: 38015
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALR CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH NYSADLDYAQYLSYLSSEDLGVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQAL HCCCCCCHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH GQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIVPTLISALSDLPEIRLAALSG HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC LRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDV HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH VPALIACLSDPKPGIRAAAAASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGK HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCC K C >Mature Secondary Structure MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALR CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH NYSADLDYAQYLSYLSSEDLGVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQAL HCCCCCCHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH GQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIVPTLISALSDLPEIRLAALSG HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC LRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDV HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH VPALIACLSDPKPGIRAAAAASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGK HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA