Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486131

Identifier: 124486131

GI number: 124486131

Start: 1338491

End: 1339576

Strand: Reverse

Name: 124486131

Synonym: Mlab_1313

Alternate gene names: NA

Gene position: 1339576-1338491 (Counterclockwise)

Preceding gene: 124486132

Following gene: 124486129

Centisome position: 74.22

GC content: 55.8

Gene sequence:

>1086_bases
ATGAAAAAATCTGCCTTCGATGACTTAGTCGCTGCTGTCAGGAGTGATGACAGCGCAAGGCAGGAGTCTGCGGCGAACAA
GATCTGTTCATTGAACGATCCTGTTTCACTCTCTCATATTTTGTCCGTCCTCAAAGAGGATGATCCTCTGACCCAGCGCG
TTATGCTCTGGGCGCTGCGGAATTATTCGGCAGATCTTGATTACGCGCAGTATCTTTCGTATCTTTCCTCCGAGGATCTC
GGGGTCCGCGAAGCCGCGCTTATGCTCTTTATCGACGGAGGCCAGTCGGCAGTCGACACGCTGGTTACCGGCGTTTCTTC
TCCGCATATGGCGATTCAGTATGCGTCTGTCCAGGCCCTTGGCCAATTTCGGGCTCCGGCAGCGATCCCTGCGCTGATCT
CTGCTGCCTCGTCATCCGAACAGGATATCCGGGAGATCGCCGTGATGTCTCTTGGGGTTTATCACGATCAGATGATCGTT
CCAACGCTCATCTCTGCGTTGTCGGATCTTCCTGAGATCAGGCTGGCGGCTCTCTCCGGTCTTCGCGGCCGGCAGCTGAC
CCGGGATGAGCTTTCGGCCGTTTTGAACGTTCTGACCGATGAATGCGAGGATATTCGCGCCGCCGCCGTGTATGTTCTGG
ATGCGCTGACTCCGGGCTCGCTCACCGCCGATTCTTCGCCGTATGTCAGGCGGGCCCTTGCTTCGGTGACCGCCGAGGTC
CCTGTTCTTACCGAATTATGCTGTGACTCCGATCACTCGGTGAGATCGGCAGCGGCCGAATCGGTCCGAAAGCAGAAACT
CAATCTGGAAGACACGCTTCTTCCGCTTCTTTCGGATTCGGTTCCGGGTGTTCGCCGGGCCGCTGCGTCTGCTCTCGGCA
ACTCAACAAGGCCTGATGTGGTCCCTGCTTTGATTGCCTGCCTTTCCGATCCAAAACCCGGGATCCGTGCCGCCGCTGCA
GCTTCGCTTGGAAATATCGGCGGCGAGCCGGTGATTTTAGCACTGAAAGAGGCGGCAAATACCAATAATCCGATCCTTGC
AGGGATCATTAAAAACGCTTTGACTACCGCGGAAGGAAAAAAATAA

Upstream 100 bases:

>100_bases
CGCCTGTTTCAAGGCAAAAGCCGGCGATGTTGTGGGCCCGGTCAAAACCCAGTTCGGCTGGCATATCATCAAAGTAACCG
ATATTAAGAACTGATCCTCT

Downstream 100 bases:

>100_bases
TCACTCGACCGCAGTTCTCACTGCGATCTCTGTTTCCATTCTTTTGACTTCGTTTTCCACATCTTCTATCTCGATCATCT
TGACGCGTTTTTCCATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL
GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV
PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV
PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA
ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK

Sequences:

>Translated_361_residues
MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL
GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV
PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV
PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA
ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK
>Mature_361_residues
MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALRNYSADLDYAQYLSYLSSEDL
GVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQALGQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIV
PTLISALSDLPEIRLAALSGLRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV
PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDVVPALIACLSDPKPGIRAAAA
ASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38015; Mature: 38015

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALR
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
NYSADLDYAQYLSYLSSEDLGVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQAL
HCCCCCCHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
GQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIVPTLISALSDLPEIRLAALSG
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
LRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
VPALIACLSDPKPGIRAAAAASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGK
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure
MKKSAFDDLVAAVRSDDSARQESAANKICSLNDPVSLSHILSVLKEDDPLTQRVMLWALR
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
NYSADLDYAQYLSYLSSEDLGVREAALMLFIDGGQSAVDTLVTGVSSPHMAIQYASVQAL
HCCCCCCHHHHHHHHCCCCCCHHEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
GQFRAPAAIPALISAASSSEQDIREIAVMSLGVYHDQMIVPTLISALSDLPEIRLAALSG
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
LRGRQLTRDELSAVLNVLTDECEDIRAAAVYVLDALTPGSLTADSSPYVRRALASVTAEV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PVLTELCCDSDHSVRSAAAESVRKQKLNLEDTLLPLLSDSVPGVRRAAASALGNSTRPDV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
VPALIACLSDPKPGIRAAAAASLGNIGGEPVILALKEAANTNNPILAGIIKNALTTAEGK
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA