| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is egsA
Identifier: 124486126
GI number: 124486126
Start: 1332135
End: 1333217
Strand: Reverse
Name: egsA
Synonym: Mlab_1308
Alternate gene names: 124486126
Gene position: 1333217-1332135 (Counterclockwise)
Preceding gene: 124486129
Following gene: 124486125
Centisome position: 73.86
GC content: 55.12
Gene sequence:
>1083_bases ATGGAAGCTAAGAATAATAGGATACTCAAGGATAAAACCTTTGACAAATCCCGGTGGATTCAGATGCCGAGGGATGTGAT CGCCGGTCACGATGCTTTGCTTCAGCTTCCTAACGTCATCACCGATCTGGGTGTCACCGGTCCATTACTTCTTCTTTCGG GAAAAACGACCCTGCAGACCGTGGGTCTCGAGGTTCTCCGGCTTTTGGAAGACCGACAGGTCACAAGCGCAGTAGTCGGG GAGATCACCTATGAGGAGATCGCGAGGGTCGAGGATCTGGCGCAAAACATCGGTGCGGTTTTGATCATCGCTGTGGGTGG AGGCCGGGTTATCGATACGGCCAAGGTCGTCTCCTACAATCTCGATATCCAGTTCATCAGTGTTCCAACCGCCGCATCCC ATGACGGTATCGCCTCTTCGCGGGCCTCGATCATGACGGCAGACGGGAATGTGAGCGTGGCGGCCCATCCGCCGCTCGCC ATCGTCGCCGACACGGGAATTATAGCGGGGGCCCCGCACCGGCTGATGGCTGCCGGGTATGCGGATATGGTGGCAAACTA TACCGCCGTCATGGATTGGGATCTTTCAAAATCAAAGACCGGCGAACAGGTCAGCGAATATGCGATGACGCTCTCCATGA TAACCGCCGAACTGATGGTGGAGAATGCGGAAAAGATCAAGGCCTTCGATGAAAATGCGGCCTGGATCGTTGTAAAGGCG TTGTTTGCCTCCGGCGTTGCGATGAGTATCGCCGGAAGTTCCCGCCCGGCATCGGGAGGTGAACACAAGTTTGCCCATAT GCTCGAACGTCTGGTTCCCGGAAAAGTCCTTCACGGGGAAGCCTGCGGGGTTGGGACCATCATCAGTATGATCATGCACG AAGGAGACTGGAAAAAGATCCGGAACTCTCTTCGGTTGATCGGCGCCCCGACAACGCCGAAGGATCTCGGCATTTCCGAC GAGATCGTCATTGAGGCAATTCTTCGGGCAAAAGAGATCCGCCCTGAGCGCTACACCATCTTTGATGAGGATATTACCAG AGAGCAGGCCGAGTGTCTGGTCGCCCGCTTATATGAGGAGTAA
Upstream 100 bases:
>100_bases ACTAATAAAGCATACAAAATCGTCTGGATGACCGTATAGGTTGAGCCCTCCAGTTCGACTATCCACGCATATAATTCATT AAACATATAGGATCACGACC
Downstream 100 bases:
>100_bases ATCATGGATAAGGAAGAAACAATCGTAACAATCGTCGGCTCGGTTTTAGCTCATGAGGGTGCCGAGTTCGTGTATGCCGG AAAAGCAGCCGAATGCGAAT
Product: NAD(P)-dependent glycerol-1-phosphate dehydrogenase
Products: NA
Alternate protein names: G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MEAKNNRILKDKTFDKSRWIQMPRDVIAGHDALLQLPNVITDLGVTGPLLLLSGKTTLQTVGLEVLRLLEDRQVTSAVVG EITYEEIARVEDLAQNIGAVLIIAVGGGRVIDTAKVVSYNLDIQFISVPTAASHDGIASSRASIMTADGNVSVAAHPPLA IVADTGIIAGAPHRLMAAGYADMVANYTAVMDWDLSKSKTGEQVSEYAMTLSMITAELMVENAEKIKAFDENAAWIVVKA LFASGVAMSIAGSSRPASGGEHKFAHMLERLVPGKVLHGEACGVGTIISMIMHEGDWKKIRNSLRLIGAPTTPKDLGISD EIVIEAILRAKEIRPERYTIFDEDITREQAECLVARLYEE
Sequences:
>Translated_360_residues MEAKNNRILKDKTFDKSRWIQMPRDVIAGHDALLQLPNVITDLGVTGPLLLLSGKTTLQTVGLEVLRLLEDRQVTSAVVG EITYEEIARVEDLAQNIGAVLIIAVGGGRVIDTAKVVSYNLDIQFISVPTAASHDGIASSRASIMTADGNVSVAAHPPLA IVADTGIIAGAPHRLMAAGYADMVANYTAVMDWDLSKSKTGEQVSEYAMTLSMITAELMVENAEKIKAFDENAAWIVVKA LFASGVAMSIAGSSRPASGGEHKFAHMLERLVPGKVLHGEACGVGTIISMIMHEGDWKKIRNSLRLIGAPTTPKDLGISD EIVIEAILRAKEIRPERYTIFDEDITREQAECLVARLYEE >Mature_360_residues MEAKNNRILKDKTFDKSRWIQMPRDVIAGHDALLQLPNVITDLGVTGPLLLLSGKTTLQTVGLEVLRLLEDRQVTSAVVG EITYEEIARVEDLAQNIGAVLIIAVGGGRVIDTAKVVSYNLDIQFISVPTAASHDGIASSRASIMTADGNVSVAAHPPLA IVADTGIIAGAPHRLMAAGYADMVANYTAVMDWDLSKSKTGEQVSEYAMTLSMITAELMVENAEKIKAFDENAAWIVVKA LFASGVAMSIAGSSRPASGGEHKFAHMLERLVPGKVLHGEACGVGTIISMIMHEGDWKKIRNSLRLIGAPTTPKDLGISD EIVIEAILRAKEIRPERYTIFDEDITREQAECLVARLYEE
Specific function: Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol-1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea
COG id: COG0371
COG function: function code C; Glycerol dehydrogenase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerol-1-phosphate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI87082352, Length=318, Percent_Identity=24.2138364779874, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G1PDH_METLZ (A2ST19)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030742.1 - ProteinModelPortal: A2ST19 - SMR: A2ST19 - STRING: A2ST19 - GeneID: 4794656 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1308 - eggNOG: arNOG04488 - HOGENOM: HBG672951 - OMA: NRHTILR - PhylomeDB: A2ST19 - ProtClustDB: PRK00843 - BioCyc: MLAB410358:MLAB_1308-MONOMER - GO: GO:0005737 - HAMAP: MF_00497_A - InterPro: IPR002658 - InterPro: IPR023002 - InterPro: IPR016205 - PIRSF: PIRSF000112
Pfam domain/function: PF01761 DHQ_synthase
EC number: =1.1.1.261
Molecular weight: Translated: 38858; Mature: 38858
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: BINDING 135-135 BINDING 139-139 BINDING 182-182 BINDING 266-266
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKNNRILKDKTFDKSRWIQMPRDVIAGHDALLQLPNVITDLGVTGPLLLLSGKTTLQT CCCCCCCEECCCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH VGLEVLRLLEDRQVTSAVVGEITYEEIARVEDLAQNIGAVLIIAVGGGRVIDTAKVVSYN HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEEEE LDIQFISVPTAASHDGIASSRASIMTADGNVSVAAHPPLAIVADTGIIAGAPHRLMAAGY CEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCEECCCCHHHHHHHH ADMVANYTAVMDWDLSKSKTGEQVSEYAMTLSMITAELMVENAEKIKAFDENAAWIVVKA HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHH LFASGVAMSIAGSSRPASGGEHKFAHMLERLVPGKVLHGEACGVGTIISMIMHEGDWKKI HHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCHHHH RNSLRLIGAPTTPKDLGISDEIVIEAILRAKEIRPERYTIFDEDITREQAECLVARLYEE HHCCEEEECCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEAKNNRILKDKTFDKSRWIQMPRDVIAGHDALLQLPNVITDLGVTGPLLLLSGKTTLQT CCCCCCCEECCCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH VGLEVLRLLEDRQVTSAVVGEITYEEIARVEDLAQNIGAVLIIAVGGGRVIDTAKVVSYN HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEEEE LDIQFISVPTAASHDGIASSRASIMTADGNVSVAAHPPLAIVADTGIIAGAPHRLMAAGY CEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCCEECCCCHHHHHHHH ADMVANYTAVMDWDLSKSKTGEQVSEYAMTLSMITAELMVENAEKIKAFDENAAWIVVKA HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHH LFASGVAMSIAGSSRPASGGEHKFAHMLERLVPGKVLHGEACGVGTIISMIMHEGDWKKI HHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCHHHH RNSLRLIGAPTTPKDLGISDEIVIEAILRAKEIRPERYTIFDEDITREQAECLVARLYEE HHCCEEEECCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA