Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486105

Identifier: 124486105

GI number: 124486105

Start: 1311666

End: 1311878

Strand: Reverse

Name: 124486105

Synonym: Mlab_1285

Alternate gene names: NA

Gene position: 1311878-1311666 (Counterclockwise)

Preceding gene: 124486106

Following gene: 124486104

Centisome position: 72.68

GC content: 51.17

Gene sequence:

>213_bases
ATGAAATGTTACGTATGTGAGCAGGAGGGGGTTGACCGGGACGCAACCGGTGTCTGTATCGTATGCGGCATGGGTCTCTG
CACGAAACATATGGTTCGTTCGGATGTAGAGACTTGGGAGGGGGGATATCCCTTCCCTGCAAAGAAACTGAAGCATCCGA
TCCCCCGGATACTTTGTCCTGAATGCAGTAAAGCCTGGAACGGAGAGAAATAA

Upstream 100 bases:

>100_bases
AAAGACCGTTGCCGCGCCGGTACGTGCCTGTAAGAGCTGTGCAACTGCGTGTCTTGTCGGTTCACGCCACCAGTATTGCC
AGTACCGAGAGGCTGTCTAA

Downstream 100 bases:

>100_bases
TGGATCTCGCAAGACGGTGTTTTGCGGAATTAATCGGGACGATGATCCTTGTGTTCATCGGGTGTGGCTCCGTCGTGATC
ATGCTGATGCTTGCGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Zinc Finger Protein AF

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK

Sequences:

>Translated_70_residues
MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK
>Mature_70_residues
MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK

Specific function: Unknown

COG id: COG4855

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7831; Mature: 7831

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
10.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCP
CCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
ECSKAWNGEK
CCCCCCCCCC
>Mature Secondary Structure
MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCP
CCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
ECSKAWNGEK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA