| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124486105
Identifier: 124486105
GI number: 124486105
Start: 1311666
End: 1311878
Strand: Reverse
Name: 124486105
Synonym: Mlab_1285
Alternate gene names: NA
Gene position: 1311878-1311666 (Counterclockwise)
Preceding gene: 124486106
Following gene: 124486104
Centisome position: 72.68
GC content: 51.17
Gene sequence:
>213_bases ATGAAATGTTACGTATGTGAGCAGGAGGGGGTTGACCGGGACGCAACCGGTGTCTGTATCGTATGCGGCATGGGTCTCTG CACGAAACATATGGTTCGTTCGGATGTAGAGACTTGGGAGGGGGGATATCCCTTCCCTGCAAAGAAACTGAAGCATCCGA TCCCCCGGATACTTTGTCCTGAATGCAGTAAAGCCTGGAACGGAGAGAAATAA
Upstream 100 bases:
>100_bases AAAGACCGTTGCCGCGCCGGTACGTGCCTGTAAGAGCTGTGCAACTGCGTGTCTTGTCGGTTCACGCCACCAGTATTGCC AGTACCGAGAGGCTGTCTAA
Downstream 100 bases:
>100_bases TGGATCTCGCAAGACGGTGTTTTGCGGAATTAATCGGGACGATGATCCTTGTGTTCATCGGGTGTGGCTCCGTCGTGATC ATGCTGATGCTTGCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Zinc Finger Protein AF
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK
Sequences:
>Translated_70_residues MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK >Mature_70_residues MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCPECSKAWNGEK
Specific function: Unknown
COG id: COG4855
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7831; Mature: 7831
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 10.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCP CCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC ECSKAWNGEK CCCCCCCCCC >Mature Secondary Structure MKCYVCEQEGVDRDATGVCIVCGMGLCTKHMVRSDVETWEGGYPFPAKKLKHPIPRILCP CCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC ECSKAWNGEK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA