Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486106

Identifier: 124486106

GI number: 124486106

Start: 1311879

End: 1313378

Strand: Reverse

Name: 124486106

Synonym: Mlab_1286

Alternate gene names: NA

Gene position: 1313378-1311879 (Counterclockwise)

Preceding gene: 124486107

Following gene: 124486105

Centisome position: 72.76

GC content: 52.27

Gene sequence:

>1500_bases
ATGTCCGAACTCTACAAAAAAATGATTGACGAGGCAATGGCTGCACAGCATGCCGACGTCAGCGTTCTCAAAGCGAGACG
TGGAAAGCATTTCACGCTCAAGGATGCCCGCCCCTATGTTGAGGCGGTGGAAAAGATGACTGTTGGTCCAAAACAGAGCG
CCGCGGTCATTAATCTGCACAAAGAATCCGTGAAAACGCACTTCAATGTTCTCTCGGGCTTGACCCGTCACGTCAAACCG
GAAGACGATCCCTTTGTCGAACATTATCAGACACCCGTCATTTTGGAAATTCTCCGTGATCAGGATCCAAAGTTTGCAAA
GAGTCTGGAGATCTTTGCCGACTCGATCAAAACCCACGAGGCAATCATCGGGAAGGAAGCTGCACGCTGTTATGCAGGGT
TCTACGGACCAACTTGTGTCGTCGACTTTGCTTTGATGCCGGGTTCAACCAGCAATGTCGTCAACCAGGTGCTCACGAAA
ACCGACATCCCGGTCGCTCACAAACAGGCGATTCTCGCTGCCAAATCCTGGGGTATGAACACCTCGTACGGTATCGGCGA
TCTGTTTGCAAAACGTATGGAAGCAGGTGATTCCCTTGCCGAAGCCTCGAGAAAGGAGGTTCGTCAGCTTCAGGACCTCT
ACCGCAATCCGGTAGAAGCACAGGCCAAGCTCATGCAGAAAGCGGGTATGAAATCCTTCTCCGCCAGGAGATATATGGAG
AACTACCGCAAAGGTATGGAAAAGGCGGTCAAGGCTGCGGTTGATGACGGGGTCCATTATGGAAACATCGCCACGATCCC
TGCATACTGTGTAGGGGATGTATCCCACCACATTTCCCAGTCCACCTACAACATGTGCAAGGATGATGTGATCATGGCAA
CGATCGAGGCCGTAACTAATGTTATTGAAAAAACGCTTCTTGCCGCCGTTCCAAGCATTAAGACCCCGTATCAGCTGTTG
AATGTCGCAACCGGCGCCTCGGCCGCGGCGACCGAGTATCTTCTGGAACTCGATGCATTCAATGCTCCGATGATCGTTGA
TCTTCTGACGAAGAGATACCACAACCTTGTGATGATCAAACCGACCAGAGGAGCTGCTGCAGAACTGCACAACTGCGATT
TCATGGATATGATCTACCGCGGCTGGAAGATCCTTGACAAAGCCGAGAGAGTGAAGAACGGATCGGGCCAGCCGCTTGTT
CCGAAGATCGACGGCATTCCAATCGATCTCTCACCCATCCACGAGAATGAGATCCTGATGAATCCCCAGCGCTATGCATA
CCCCGCATGTGCCATCACCGTTCGTGCCTCCGCCCTTATGCGGCTTGCCGACTATCCGTGTCTCCTGACCAGCGAACCGA
TCACCGCAACCATGATGACAAACATCATTGCACTCGACAAAAAGACCGTTGCCGCGCCGGTACGTGCCTGTAAGAGCTGT
GCAACTGCGTGTCTTGTCGGTTCACGCCACCAGTATTGCCAGTACCGAGAGGCTGTCTAA

Upstream 100 bases:

>100_bases
ATATTCCCCTAACTGCGATATTTCTTGGCATAAACTCCCATTATACATACCTTTATCATGTCTGGGAGAAATCAATAAAT
TATACCTTTTGGAGAAAAAA

Downstream 100 bases:

>100_bases
ATGAAATGTTACGTATGTGAGCAGGAGGGGGTTGACCGGGACGCAACCGGTGTCTGTATCGTATGCGGCATGGGTCTCTG
CACGAAACATATGGTTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSELYKKMIDEAMAAQHADVSVLKARRGKHFTLKDARPYVEAVEKMTVGPKQSAAVINLHKESVKTHFNVLSGLTRHVKP
EDDPFVEHYQTPVILEILRDQDPKFAKSLEIFADSIKTHEAIIGKEAARCYAGFYGPTCVVDFALMPGSTSNVVNQVLTK
TDIPVAHKQAILAAKSWGMNTSYGIGDLFAKRMEAGDSLAEASRKEVRQLQDLYRNPVEAQAKLMQKAGMKSFSARRYME
NYRKGMEKAVKAAVDDGVHYGNIATIPAYCVGDVSHHISQSTYNMCKDDVIMATIEAVTNVIEKTLLAAVPSIKTPYQLL
NVATGASAAATEYLLELDAFNAPMIVDLLTKRYHNLVMIKPTRGAAAELHNCDFMDMIYRGWKILDKAERVKNGSGQPLV
PKIDGIPIDLSPIHENEILMNPQRYAYPACAITVRASALMRLADYPCLLTSEPITATMMTNIIALDKKTVAAPVRACKSC
ATACLVGSRHQYCQYREAV

Sequences:

>Translated_499_residues
MSELYKKMIDEAMAAQHADVSVLKARRGKHFTLKDARPYVEAVEKMTVGPKQSAAVINLHKESVKTHFNVLSGLTRHVKP
EDDPFVEHYQTPVILEILRDQDPKFAKSLEIFADSIKTHEAIIGKEAARCYAGFYGPTCVVDFALMPGSTSNVVNQVLTK
TDIPVAHKQAILAAKSWGMNTSYGIGDLFAKRMEAGDSLAEASRKEVRQLQDLYRNPVEAQAKLMQKAGMKSFSARRYME
NYRKGMEKAVKAAVDDGVHYGNIATIPAYCVGDVSHHISQSTYNMCKDDVIMATIEAVTNVIEKTLLAAVPSIKTPYQLL
NVATGASAAATEYLLELDAFNAPMIVDLLTKRYHNLVMIKPTRGAAAELHNCDFMDMIYRGWKILDKAERVKNGSGQPLV
PKIDGIPIDLSPIHENEILMNPQRYAYPACAITVRASALMRLADYPCLLTSEPITATMMTNIIALDKKTVAAPVRACKSC
ATACLVGSRHQYCQYREAV
>Mature_498_residues
SELYKKMIDEAMAAQHADVSVLKARRGKHFTLKDARPYVEAVEKMTVGPKQSAAVINLHKESVKTHFNVLSGLTRHVKPE
DDPFVEHYQTPVILEILRDQDPKFAKSLEIFADSIKTHEAIIGKEAARCYAGFYGPTCVVDFALMPGSTSNVVNQVLTKT
DIPVAHKQAILAAKSWGMNTSYGIGDLFAKRMEAGDSLAEASRKEVRQLQDLYRNPVEAQAKLMQKAGMKSFSARRYMEN
YRKGMEKAVKAAVDDGVHYGNIATIPAYCVGDVSHHISQSTYNMCKDDVIMATIEAVTNVIEKTLLAAVPSIKTPYQLLN
VATGASAAATEYLLELDAFNAPMIVDLLTKRYHNLVMIKPTRGAAAELHNCDFMDMIYRGWKILDKAERVKNGSGQPLVP
KIDGIPIDLSPIHENEILMNPQRYAYPACAITVRASALMRLADYPCLLTSEPITATMMTNIIALDKKTVAAPVRACKSCA
TACLVGSRHQYCQYREAV

Specific function: Unknown

COG id: COG4883

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55135; Mature: 55004

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELYKKMIDEAMAAQHADVSVLKARRGKHFTLKDARPYVEAVEKMTVGPKQSAAVINLH
CHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEEH
KESVKTHFNVLSGLTRHVKPEDDPFVEHYQTPVILEILRDQDPKFAKSLEIFADSIKTHE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AIIGKEAARCYAGFYGPTCVVDFALMPGSTSNVVNQVLTKTDIPVAHKQAILAAKSWGMN
HHHHHHHHHHHHCCCCCHHHHEEHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
TSYGIGDLFAKRMEAGDSLAEASRKEVRQLQDLYRNPVEAQAKLMQKAGMKSFSARRYME
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
NYRKGMEKAVKAAVDDGVHYGNIATIPAYCVGDVSHHISQSTYNMCKDDVIMATIEAVTN
HHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEKTLLAAVPSIKTPYQLLNVATGASAAATEYLLELDAFNAPMIVDLLTKRYHNLVMIK
HHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEE
PTRGAAAELHNCDFMDMIYRGWKILDKAERVKNGSGQPLVPKIDGIPIDLSPIHENEILM
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
NPQRYAYPACAITVRASALMRLADYPCLLTSEPITATMMTNIIALDKKTVAAPVRACKSC
CCHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ATACLVGSRHQYCQYREAV
HHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SELYKKMIDEAMAAQHADVSVLKARRGKHFTLKDARPYVEAVEKMTVGPKQSAAVINLH
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEEH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HHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA